Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1976 ATGGTGATGCTTACTGCTTGGATCACTGACCTTTTTGCTTGCATGGGTGGTTGTTTTGGATGCTGCATGAAGCCCACACCAATTATAGCAGTGGATGAGCCAGCAAAGGGACTGAAAATTCAGGGACAAACAGTAAGAAAACCAACCATAACAGATGGTTTCTGGAGTTCAAGCACATGTGATCTGGATAACAGCATTGCTCAATCTCAAAGAAGTCTCTCATCTGCCAGTACATTAAATCAAATTATCTATAATAGCAGTGGAACCTCTACTTCAGGCACCAATGCTGAATTTGTAAACCAAGGTCTTCTCCTCTGGAATGAGAGCAGGCTTCAGTGGATTGGAAGTGGGAGATCTATGAAGCAAAGCCAACAAAATCGAGAACCCAGACTAAATTCAAATGCGACTTATGAAAGTTTGCTTGGGACTAGACAACTTTTTGCGAAGCCCATACCTTTGTCTGAAATGGTCAACTTCCTGGTAAATGTTTGGGAGCATGAAGGGATGTATGATTGA 516 0.4225 MVMLTAWITDLFACMGGCFGCCMKPTPIIAVDEPAKGLKIQGQTVRKPTITDGFWSSSTCDLDNSIAQSQRSLSSASTLNQIIYNSSGTSTSGTNAEFVNQGLLLWNESRLQWIGSGRSMKQSQQNREPRLNSNATYESLLGTRQLFAKPIPLSEMVNFLVNVWEHEGMYD* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1976 171 PANTHER OS07G0479600 PROTEIN 3 171 - -
Dod05g1976 171 PANTHER DUF4050 FAMILY PROTEIN 3 171 - -
Dod05g1976 171 Pfam Protein of unknown function (DUF4050) 134 171 IPR025124 -
Dod05g1976 171 Pfam Protein of unknown function (DUF4050) 58 129 IPR025124 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1976 Dod-Chr5 45498906 45505984 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1976 - - gmx:100813288 282.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1976 05 45498906 45505984 Dod06g2500 06 54043861 54047223 ECH
Dod05g1976 05 45498906 45505984 Dod10g2099 10 42862123 42865415 ECH
Dod05g1976 05 45498906 45505984 Dod08g1684 08 39860195 39863864 ECH
Dod05g1976 05 45498906 45505984 Dod09g0910 09 28859542 28863906 ECH
Dod05g1976 05 45498906 45505984 Dod05g1976 05 45498906 45505984 ECH