Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2119 ATGTTGCTCGGCGGTATCTTAAACAAGGGCCAAAAGATCAAAGGGACAGTGGTGTTGATGGCAAAGAATGTCTTGGACTTCAACGCCGTCGCGTCCATTGGTAGTGGCGGTGTTACTGGCATAGCTGGGAGCCTATTTGGCACTGCCACAGGCGTAGCTGGCCAGGTAGTTGACGGTGCCACTGCCATCTTCAGCCGCAACATCTCCCTGCAGTTGATCAGTGCCACCAAGACTGATGCACATGGAAATGGGAAACTCGGAAAGGAAACCTATTTGGAGAAACATCTTCCCAGCCTACCCACCTTGGGAGACAGGCAGGATGCATTCGATATTCATTTTGAATATGATGCTGATTTCGGAATTCCAGGAGCATTTTACATTAAAAATTATATGCAAGCTGAGTTCTTCCTTGTCAGTGTGACTCTTGAAGACATTCCCAATCAGGGGACACTTCACTTTGTTTGTAACTCATGGGTTTACAACTTCAAAAAATACAAGAAGGACCGCATTTTCTTTGCCAATAACACTTTTCTTCCAAGTGAAACACCTGCTGCATTAGTTAAGTACAGAGAAGAAGAGTTGCAGAACTTAAGAGGAGATGGAACAGGGCAGCGCCAGGAATGGGAAAGGATCTATGATTATGATGTGTATAATGATTTGGGCAATCCAGATGGCGGTGAAAAGCTCGTTCGTCCAATTCTTGGAGGGTCAAGCACCTACCCCTACCCTCGTAGGGTCAGAACTGGTAGAAAAGCAACCAGGAAAGATCCTAAGAGTGAGGCTCCAGGGGAGGTTTATATTCCAAGAGATGAAAACTTTGGTCACTTGAAATCATCTGACTTCCTTACATACGGAATCAAATCTTTGTCTCAAAATGTCTTGCCCCTATTTCAATCTTTGATTTTTGATTTGAACTTCACGCCGAATGAGTTTGATAGCTTCGATGAAGTGCGTGGACTCTTTGAAGGTGGAATTAAGCTGCCTACAGATATGCTCAGCCAAATTAGCCCCTTACCAGTGCTCAAGGAAATATTCCGCACCGATGGTGAACAAGTCCTCAAGTTCCCACCACCTCATGTAATCAAAGTTAGTAAGTCAGCATGGATGACTGACGAAGAATTTGCAAGAGAGATGCTTGCTGGTGTAAATCCCTGTGTAATCCGCGGTCTTAAGGCGTTCCCACCACAAAGCACGCTAGATGTCAGTGTCTACGGTGATCAAAACAGTAAAATAACAACAGCAGAGTTGGAGATTAACCTAGATGGGCTCACAGTGGAACAGGCAATAAATGATGATAGACTCTACATATTAGATTACCATGATGCTTTCATGCCTTATCTGAAGAGGATCAATGAAATTGCAAAGGCTTATGCTACAAGGACATTCCTTTTCTTAAGGGACAATGGGAAGTTAAAGCCAGTTGCCATCGAATTAAGTTTGCCACATCCTAGTGGGTACCAGTTTGGTGCCGACAGTAAGATCATCCTGCCAGCTGACCAAGGCGTTGAGAGCACAATTTGGCTATTGGCCAAGGCTCATGTAATTGTAAATGACTCGTGCTACCATCAGCTCATGAGCCACTGGTTAAACACTCATGCAGTGATTGAGCCATTCGCCATAGCAACAAACAGGCACCTCAGTGTGCTTCACCCTATTCATAAACTTCTATATCCTCATTACCGTGACACGATTAATATCAATGGACTTGCTCGGCAATCACTGATCAACGCAGGTGGCATTATAGAGCAATCATTCTTGCCCGGCCCGAATTCTATAGAGATGTCTTCAGCAGTTTACAAGAACTGGGTTTTCACGGACCAAGCATTACCAGCTGATCTCATCAAGAGAGGATTGGCAGTTGAAGATGCTTCTTGTCCTCATGGCCTTCGTCTTGTGATAAAGGACTACCCATATGCTGTTGACGGATTGGAGATATGGGATGCTATTACTACATGGGTGCAGGACTATGTCTCCCTGTATTATGCTTCAGATGATGCAGTTCAGAAAGATTCTGAATTGCAAGCCTGGTGGAAGGAAGCAGTGGAGAAGGGTCATGAGGACCTCAAAGATAAGCCATGGTGGCCTAGAATGGAAACCATTGATGAGCTGATACAATCCTGCTCCATCATTGTGTGGACCGCTTCGGCCCTCCATGCAGCTGTTAATTTCGGACAGTATCCTTATGGCGGTTATATCTTGAACCGTCCAACTCTTAGCAGGAGATTGATCCCAGAGAAAGGAACTACAGAGTATGATGAGATGGTGAAGAGTCCTCAAAAGGCTTATCTGAGGACAATCACACCAAAATATCAGACCTTGGTTGACATCTCAGTGATTGAGATATTGTCAAGGCATGCTTCAGATGAAGTCTACCTTGGCCAGAGGGACAATCCTAACTGGACAACTGATTCAAAGGCAATACAAGCCTTCAAAAAGTTTGGAAGCAAGTTGCAAGAGATTGAGGCCAAAATCACAGAGAGGAACAAGGACTCAAGCTTGTCCAACCGAACTGGACCTATTGAACTGCCCTACACTCTGCTTGCTCCTTCCAGTGGTGAAGGGTTGACCTTCAGGGGAATTCCCAACAGCATTTCAATCTAA 2601 0.4491 MLLGGILNKGQKIKGTVVLMAKNVLDFNAVASIGSGGVTGIAGSLFGTATGVAGQVVDGATAIFSRNISLQLISATKTDAHGNGKLGKETYLEKHLPSLPTLGDRQDAFDIHFEYDADFGIPGAFYIKNYMQAEFFLVSVTLEDIPNQGTLHFVCNSWVYNFKKYKKDRIFFANNTFLPSETPAALVKYREEELQNLRGDGTGQRQEWERIYDYDVYNDLGNPDGGEKLVRPILGGSSTYPYPRRVRTGRKATRKDPKSEAPGEVYIPRDENFGHLKSSDFLTYGIKSLSQNVLPLFQSLIFDLNFTPNEFDSFDEVRGLFEGGIKLPTDMLSQISPLPVLKEIFRTDGEQVLKFPPPHVIKVSKSAWMTDEEFAREMLAGVNPCVIRGLKAFPPQSTLDVSVYGDQNSKITTAELEINLDGLTVEQAINDDRLYILDYHDAFMPYLKRINEIAKAYATRTFLFLRDNGKLKPVAIELSLPHPSGYQFGADSKIILPADQGVESTIWLLAKAHVIVNDSCYHQLMSHWLNTHAVIEPFAIATNRHLSVLHPIHKLLYPHYRDTININGLARQSLINAGGIIEQSFLPGPNSIEMSSAVYKNWVFTDQALPADLIKRGLAVEDASCPHGLRLVIKDYPYAVDGLEIWDAITTWVQDYVSLYYASDDAVQKDSELQAWWKEAVEKGHEDLKDKPWWPRMETIDELIQSCSIIVWTASALHAAVNFGQYPYGGYILNRPTLSRRLIPEKGTTEYDEMVKSPQKAYLRTITPKYQTLVDISVIEILSRHASDEVYLGQRDNPNWTTDSKAIQAFKKFGSKLQEIEAKITERNKDSSLSNRTGPIELPYTLLAPSSGEGLTFRGIPNSISI* 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2119 866 PRINTS Plant lipoxygenase signature 241 260 IPR001246 GO:0016491
Dod06g2119 866 PRINTS Plant lipoxygenase signature 392 411 IPR001246 GO:0016491
Dod06g2119 866 PRINTS Plant lipoxygenase signature 779 793 IPR001246 GO:0016491
Dod06g2119 866 PRINTS Plant lipoxygenase signature 169 190 IPR001246 GO:0016491
Dod06g2119 866 PRINTS Plant lipoxygenase signature 143 161 IPR001246 GO:0016491
Dod06g2119 866 PRINTS Plant lipoxygenase signature 308 329 IPR001246 GO:0016491
Dod06g2119 866 PRINTS Plant lipoxygenase signature 457 481 IPR001246 GO:0016491
Dod06g2119 866 PRINTS Plant lipoxygenase signature 353 369 IPR001246 GO:0016491
Dod06g2119 866 PRINTS Plant lipoxygenase signature 208 224 IPR001246 GO:0016491
Dod06g2119 866 CDD PLAT_LH2 12 174 IPR042057 -
Dod06g2119 866 ProSiteProfiles PLAT domain profile. 50 173 IPR001024 GO:0005515
Dod06g2119 866 PANTHER SEED LINOLEATE 9S-LIPOXYGENASE 5 866 - -
Dod06g2119 866 ProSitePatterns Lipoxygenases iron-binding region signature 1. 522 536 IPR020833 GO:0016702|GO:0046872
Dod06g2119 866 PRINTS Lipoxygenase signature 542 562 IPR013819 GO:0016702|GO:0046872
Dod06g2119 866 PRINTS Lipoxygenase signature 522 539 IPR013819 GO:0016702|GO:0046872
Dod06g2119 866 PRINTS Lipoxygenase signature 504 521 IPR013819 GO:0016702|GO:0046872
Dod06g2119 866 PANTHER LIPOXYGENASE 5 866 IPR000907 GO:0016702|GO:0046872
Dod06g2119 866 Gene3D PLAT/LH2 domain 3 177 - -
Dod06g2119 866 SUPERFAMILY Lipoxigenase 178 866 IPR036226 -
Dod06g2119 866 Pfam Lipoxygenase 186 849 IPR013819 GO:0016702|GO:0046872
Dod06g2119 866 SMART LH2_4 11 174 IPR001024 GO:0005515
Dod06g2119 866 Gene3D - 178 276 - -
Dod06g2119 866 Gene3D - 500 865 - -
Dod06g2119 866 Gene3D - 366 499 - -
Dod06g2119 866 Pfam PLAT/LH2 domain 78 172 IPR001024 GO:0005515
Dod06g2119 866 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 176 866 IPR013819 GO:0016702|GO:0046872
Dod06g2119 866 ProSitePatterns Lipoxygenases iron-binding region signature 2. 549 559 IPR020834 GO:0016702|GO:0046872
Dod06g2119 866 Gene3D - 277 365 IPR027433 -
Dod06g2119 866 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 10 177 IPR036392 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2119 Dod-Chr6 42952587 42958448 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2119 4 866 Acyl Lipid Metabolism Gene Families AT1G55020 55.530 0.0 996
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2119 K15718 - gmx:100127399 1387.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1867 10 40140196 40144373 Dod06g2119 06 42952587 42958448 PCT