Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2113 ATGTTTCCAAGGCTGGCGGGCCTGGTTCACAGGGGCCAGAAGCTGAAAGGGACAGTGGTGTTGATGCAAAAAAATGTGTTGGACATCAACGCCCTCACCACTGCTCAGAGTGTCACTGGCGTCATCGGTGGTGCCATCGGTGTGGTCGGTGGTATCCTTGGCACAACAGTTGATACCCTCACTTCCTTTTTGGGTCGATCTGTTGCTCTGAGGTTGATTAGTGCTACCAGTGCTGATGGATCTGGAAAGGGGAAAGTGGGGAAGCAGACCTTTCTGGAAGGTCTTGTTACCTCGTTACCAACCTTGGGAGCAGGACAATCTGCATTCAAGATTCATTTTGAATGGGACAGCGACATGGGAATTCCTGGAGCATTTTATATCGAGAATTTTATGCAAGTTGAGTTCTATCTTGTGAGTTTAACTCTTGAAGACGTTCCGAACCAGGGGACCATCCACTTTTCTTGCAACTCATGGGTTTATAATTCCAAAAAGTACAAAAGTGATCGTATTTTCTTCGCCAATAAGAACCCTCAAAAGGTGTTTTTGAGGACAATTACTGGAAAGAAGGAGACTATTACTGACCTTACAATCATAGAGGTATTGTCAAGGCATGCTTCTGATGAGCTGTACCTTGGACAGAGAGATGGTGGTGACAATTGGACTGCTGACACTGCCCCAAAAGAGGCATTCAAGAGGTTTGGAAAGAAGTTGGTTGAAATTGAGCAAAAGCTCATACAAAGGAACAAAGATGAGAGACTGAGGAACCGATATGGGCCGGTGCAGATGCCCTATACACTGCTTTATCCTTCGAGTGAGGAAGGATTGACCTTCAGAGGCATTCCTAATAGTATCTCTATCTAA 861 0.4553 MFPRLAGLVHRGQKLKGTVVLMQKNVLDINALTTAQSVTGVIGGAIGVVGGILGTTVDTLTSFLGRSVALRLISATSADGSGKGKVGKQTFLEGLVTSLPTLGAGQSAFKIHFEWDSDMGIPGAFYIENFMQVEFYLVSLTLEDVPNQGTIHFSCNSWVYNSKKYKSDRIFFANKNPQKVFLRTITGKKETITDLTIIEVLSRHASDELYLGQRDGGDNWTADTAPKEAFKRFGKKLVEIEQKLIQRNKDERLRNRYGPVQMPYTLLYPSSEEGLTFRGIPNSISI* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2113 286 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 13 175 IPR036392 GO:0005515
Dod06g2113 286 PANTHER LIPOXYGENASE 8 175 IPR000907 GO:0016702|GO:0046872
Dod06g2113 286 SUPERFAMILY Lipoxigenase 172 286 IPR036226 -
Dod06g2113 286 SMART LH2_4 13 174 IPR001024 GO:0005515
Dod06g2113 286 Pfam Lipoxygenase 174 269 IPR013819 GO:0016702|GO:0046872
Dod06g2113 286 ProSiteProfiles PLAT domain profile. 48 173 IPR001024 GO:0005515
Dod06g2113 286 Gene3D PLAT/LH2 domain 4 176 - -
Dod06g2113 286 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 175 286 IPR013819 GO:0016702|GO:0046872
Dod06g2113 286 Pfam PLAT/LH2 domain 80 172 IPR001024 GO:0005515
Dod06g2113 286 PANTHER LINOLEATE 9S-LIPOXYGENASE-4 8 175 - -
Dod06g2113 286 PANTHER LINOLEATE 9S-LIPOXYGENASE-4 175 286 - -
Dod06g2113 286 CDD PLAT_LH2 14 174 IPR042057 -
Dod06g2113 286 PANTHER LIPOXYGENASE 175 286 IPR000907 GO:0016702|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2113 Dod-Chr6 42476712 42478442 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2113 175 286 Acyl Lipid Metabolism Gene Families AT1G55020 58.036 2.27e-36 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2113 K15718 - gmx:100816880 285.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2113 06 42476712 42478442 Dod10g1867 10 40140196 40144373 PCT