Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2001 ATGGCTGTCCCCGCTTCCTACCTCAATGCTACAGAAAAGAAGCACTGGTGGCTCACCAACCGAAAGATTGTTGAGAAATATGTCAAAGACGCTCGCAGCCTCATTGCGACACAGGAGGAGAGTGAGATCGCTTCGGCTCTGAACCTTCTAGATGCTGCTCTGGCCATATCACCACGCCTAGAACAAGCCCTCGAACTCAGAGCAAGGTCTCTGATATTTCTCCGCAGGTTCAAGGACGTGGCCGATATGCTTCAGGACTACATTCCCAGCATGAGAATGGCCAACGACAATGACTCAGGTTCTGTCTCTTCAGATGGATCCTCTCAGCAGCTTTCGAGGGAGGGTGTGAAGCTCCTCTCATCTTCTTCCTCTGATTCCCCTGTTAGAGATCAGAGTTTCAAGTGCTTCGCTGTCCCAGACTTGAAGAAGAAGCTTCTGGCAGGACTCTGTAAAAGTTGCGAGAAGGAAGGGCATTGGAGGTACCTGGTGTTGGGCAAAGCGTGCTGCCAGCTAGGCCTAATGGAGGATGCAATGGTTCTCCTCCAAACTGGCAAGCGCCTAGCGAGCGCCGCATTCCGCCGCGAGAGCATCTGCTGGACCGACGACAGCTTCTCCCTCTCCCCCACCCACTCGGCCGCCGCCGCCGACCCCTCAATCCCACCACCCTCCTCCTCTACCACCGCCACCGCCGCCACCACCCAACCCCGTACCCTTCTAACGGGATTGGAGTCCGTGACACACCTCCTTGCCCACATCAAGCTCCTCCTCCGCCGCCGCGCCGCCGCCCTCGCCGCCCTCGACGCTGGCCTCCACTCCGAGGCCATCCGCCACTTCTCCAAGATCATCGACTCCCGCCGCGGCGCGCCGCAAGGGTTCCTCGCCCAGTGCTACATGCACCGAGCCTCGGCTCACCGCTGCGCCGGGCGCGTCGCAGACGCCATCGCTGACTGTAACCGCACCCTCGCCCTCGACCCAAGCTGCATCCAAGCCCTCCACACCCGAGCCTCCCTCCTCGAAACCATTCGCTGCTTCCCAGACTCCCTTCACGACCTCGAGCACCTCAAGCTCCTTTACAACTCAATCCTCCGCGAACGCAAGCTCCCTGGCCCTTCCTGGAAGCAGCACAACGTCAGGTACGCCGAGATGCCCGGGAGGCTCTGCGCTCTCACCAATAAGATTCGGGAATTGAAGCAGAGGGTGGCCTCTGGGGACATTGGTAATAATGTTGATTACTACGCCTTGATTGGCTTGAGACGTGGGTGTTCTCGCTCGGAGTTGCAGAGGGCTCATCTTTTGTTGTGCCTGAAACACAAGCATGATAAGGCCACGAGCTTCATCGACCGGTGCGAGCTTGCGGATGAGCGTGACATTGACAGCGTTAGGGAGAGGGCGAAGATGTCGGCGTTGATTCTGTATAGGCTGATTCAGAAGGGTTACGCGAGCGTGATGGCGAATATCGTGGAGGAGGAAGCCGCCGGGAAGCAGAGGAAGAGGGCATCGCATGCTGTTGCTATTCAAGTGACGACGGAGAGTGAAGTGAACAACAACAGCAGCAGCAGCGGTGATAGGTGCGCATTATTGTCTTCGCCTTCCACTGCGAATCCTTCGGCGTTTCAGGGTGTGTTTTGCCGGGACCTTGCTGTGGTTGGGAACCTGCTTTCCCAAGTGGGGTTCAACCGTTCGATTCCAATTAAGTATGAGTATGAGGCATTGAGCTGCTAA 1722 0.5738 MAVPASYLNATEKKHWWLTNRKIVEKYVKDARSLIATQEESEIASALNLLDAALAISPRLEQALELRARSLIFLRRFKDVADMLQDYIPSMRMANDNDSGSVSSDGSSQQLSREGVKLLSSSSSDSPVRDQSFKCFAVPDLKKKLLAGLCKSCEKEGHWRYLVLGKACCQLGLMEDAMVLLQTGKRLASAAFRRESICWTDDSFSLSPTHSAAAADPSIPPPSSSTTATAATTQPRTLLTGLESVTHLLAHIKLLLRRRAAALAALDAGLHSEAIRHFSKIIDSRRGAPQGFLAQCYMHRASAHRCAGRVADAIADCNRTLALDPSCIQALHTRASLLETIRCFPDSLHDLEHLKLLYNSILRERKLPGPSWKQHNVRYAEMPGRLCALTNKIRELKQRVASGDIGNNVDYYALIGLRRGCSRSELQRAHLLLCLKHKHDKATSFIDRCELADERDIDSVRERAKMSALILYRLIQKGYASVMANIVEEEAAGKQRKRASHAVAIQVTTESEVNNNSSSSGDRCALLSSPSTANPSAFQGVFCRDLAVVGNLLSQVGFNRSIPIKYEYEALSC* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2001 573 CDD DnaJ 410 444 IPR001623 -
Dod06g2001 573 PANTHER - 1 573 - -
Dod06g2001 573 SUPERFAMILY TPR-like 260 354 IPR011990 GO:0005515
Dod06g2001 573 MobiDBLite consensus disorder prediction 210 232 - -
Dod06g2001 573 SMART tpr_5 158 191 IPR019734 GO:0005515
Dod06g2001 573 SMART tpr_5 294 327 IPR019734 GO:0005515
Dod06g2001 573 Gene3D Tetratricopeptide repeat domain 243 368 IPR011990 GO:0005515
Dod06g2001 573 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2001 Dod-Chr6 31908975 31914631 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2001 - - gmx:100800231 753.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2001 06 31908975 31914631 Dod06g2001 06 31908975 31914631 ECH
Dod01g3143 01 72307680 72311313 Dod06g2001 06 31908975 31914631 PCT