Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3143 ATGGCTGTCACCTCTCCCTCTATATCTTCTACAGAAAAGAAGCACTGGTGGCTTACCAACAGAAAGATTGTTGAGAAATACATCAAGGACGCAAGGAGCCTCCTTGCGACACAAGAACAGAGCGAGATCGCTTCGGCTCTGAACCTTCTAGATGCTGCACTGGTCATATCGCCGCGGCTTGACCAAGCCCTCGAGCTCAGAGCGAGGTCTCTGCTGTACCTGCGGCGGTACAAGGAGGTCGCCGATATGCTTCAGGACTACATTCCCAGCCTCAGAATGGCGAACGATGACTCGGGCTCTGTTTCGTGTGACAGCTCTTCGAGGGAGGGAGTGAAGCTTCTCTCCCCTGAATCCCCCGCGAGGGATCAGAGCTTCAAGTGCTTCTCCGTTTCAGACCTCAAGAAGAAGGTCATGGCTGGGCTGTGTAAAACCTGCGACAAGGAGGGGCAATGGAGGTACTTGGTTTTGGGTCAAGCATGCTGCCACCTAGGCCTAATGGAGGACGCAATGGTGCTCCTCCAAACCGGAAAACGCCTCGCCACCGCCGCCTTCCGCCGCGAGAGCGTCTGCTGGTCCGACGACAGCTTCCCACTCTCCACCCCCTTCTGCAACGGCGACTCCGCCACCACAAACCCACCTCCACCACCCCCCTCCACCCCGCCCCGCACCCCACTCACGGACGCCGACCACGTCTCCCAGCTTCTCACCCACATCAAGTTCCTCCTCCGCCGCCGCGCCGCAGCCCTCGCAGCCCTTGACGCAGGCCTCCACTCCGAAGCCATCCGCCATTTCTCCAAGATCCTGGACGGCCGCCGTGCCGCCCCTCAGGCCTTCCTCGCCGAGTGCTACATGCACAGAGCCTCCGCCTACCGCTCCTCCGGCCGCATCGCCGAGTCCATCGCCGACTGCAACCGCACCCTCGCTCTCGACCCCACCTGCATTCCAGCACTTGACACCAGGGCCTCCCTCTTCGAAGCAATTCGATGCCTCCCAGATTCCCTCCACGACCTTGAACACCTGAAGCTTCTTTACAATTCAATTCTGAGGGATCGCAAGCTTCCTGGCCCTGCTTGGAAGCGCCAGAACGTGAGGTACAGGGAGATTCCTGGGAGGCTCTGCGCCCTCGCTGCGAAGACTCAGGAGCTGAAGCAGAGGCTTGCTTCAGGAGAGTGTGGGAATGTTGATTACTATGCTCTGATTGGTGTGAGGAGAGGGTGCTCAAGGTCTGAGCTTGAGAGGGCTCATTTGCTGCTTTGCTTGCGGCACAAGCCGGATAAGGCTACTGGGTTCATTGAAAGGTGCGAGCTTGCGGATGAGCGTGACCTCGAAACGGTTAAGGAGAAGGCGAAGATGTCGGCTCTGTTGCTGTATAGGTTGGTTCAGAAGGGTTACACGAGCTTGATGGGTGCAATTATGGATGACGAGGCTGCTGAGAAGCAGAGGAAGAAGGCTGCATTGCATGCTCACGCAGTTCAGGTGCAGCAAAAAACTATGGTTCCTTCTTCTGAGTTGAATAATAATAACAACAGCAATAACAAGGCAGATGAATTAGTTTCTACTAATAGCAATGTCTCGGTGGAGAGTAATAAGTCTCTGATATCATCTTCCACTGTGAATCCTGCGGTATTCCAAGGTGTTTTCTGCCGTGATCTTGCTGTGGTTGGGAGCTTGCTTTCACAGGTTGGGTTCAACAGGCCAATTCCGGTGAAGTATGAAGCCTTAAGCTGCTGA 1731 0.5586 MAVTSPSISSTEKKHWWLTNRKIVEKYIKDARSLLATQEQSEIASALNLLDAALVISPRLDQALELRARSLLYLRRYKEVADMLQDYIPSLRMANDDSGSVSCDSSSREGVKLLSPESPARDQSFKCFSVSDLKKKVMAGLCKTCDKEGQWRYLVLGQACCHLGLMEDAMVLLQTGKRLATAAFRRESVCWSDDSFPLSTPFCNGDSATTNPPPPPPSTPPRTPLTDADHVSQLLTHIKFLLRRRAAALAALDAGLHSEAIRHFSKILDGRRAAPQAFLAECYMHRASAYRSSGRIAESIADCNRTLALDPTCIPALDTRASLFEAIRCLPDSLHDLEHLKLLYNSILRDRKLPGPAWKRQNVRYREIPGRLCALAAKTQELKQRLASGECGNVDYYALIGVRRGCSRSELERAHLLLCLRHKPDKATGFIERCELADERDLETVKEKAKMSALLLYRLVQKGYTSLMGAIMDDEAAEKQRKKAALHAHAVQVQQKTMVPSSELNNNNNSNNKADELVSTNSNVSVESNKSLISSSTVNPAVFQGVFCRDLAVVGSLLSQVGFNRPIPVKYEALSC* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3143 576 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 576 - -
Dod01g3143 576 SUPERFAMILY TPR-like 246 342 IPR011990 GO:0005515
Dod01g3143 576 MobiDBLite consensus disorder prediction 202 227 - -
Dod01g3143 576 SUPERFAMILY Chaperone J-domain 390 429 IPR036869 -
Dod01g3143 576 SMART tpr_5 280 313 IPR019734 GO:0005515
Dod01g3143 576 MobiDBLite consensus disorder prediction 208 223 - -
Dod01g3143 576 PANTHER - 1 576 - -
Dod01g3143 576 Gene3D DnaJ domain 377 498 IPR036869 -
Dod01g3143 576 Gene3D Tetratricopeptide repeat domain 236 353 IPR011990 GO:0005515
Dod01g3143 576 CDD DnaJ 395 429 IPR001623 -
Dod01g3143 576 SMART dnaj_3 394 476 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3143 Dod-Chr1 72307680 72311313 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3143 - - gmx:100808420 857.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3143 01 72307680 72311313 Dod01g3143 01 72307680 72311313 ECH
Dod01g3143 01 72307680 72311313 Dod06g2001 06 31908975 31914631 PCT