Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1995 ATGTACAATGGAGGGATGGCGGGGCTGACATATTGGAGCCCTAACGTGAACATCTTCAGAGACCCAAGGTGGGGCCGTGGACAGGAGACTCCCGGTGAGGACCCATTGCTAGCCGGTAGATATGCTGCCAATTACGTGAGGGGGCTACAGGGAACGGATGGCATCCGGTTGAAAGTGGCTGCTTCTTGCAAACATTTTACGGCTTATGACCTAGATAATTGGAACGGTGTGGATCGCTTTCACTTTAATGCTAAGGTTAGCAAGCAGGACATAGAGGACACCTTCGATGTGCCATTCCGGATGTGCGTGAAGGAAGGCAAAGTGGCGAGTGTCATGTGTTCTTACAATCAGGTCAATGGTGTCCCTACCTGTGCAGATCCCAACCTTCTAAAGAGAACAGTTCGTGGCCAATGGCGTCTAGATGGGTACATTGTATCAGATTGTGACTCTGTTGGGGTGTTCTATACTAGCCAGCATTATACATCCACACCGGAAGAAGCTGCAGCCGATGCCATCAAAGCAGGCTATCTCAATGTTGCAGGTTTGGATTTAGATTGTGGGCCTTTTCTAGCAGTGCATACACAGAATGCGGTCCAAAAAGGCTTGGTAAGTGAAGCTGACGTGAATGGAGCTTTGGTGAACACGCTAACAGTGCAAATGAGGTTAGGGATGTTCGATGGTGAGCCATCAGCGCAGCCGTATGGCAACTTGGGTCCAAGAGATGTGTGCACCCCAGCTCACCAAGAGCTCGCCCTTGAAGCTGCCAGGCAAGGGATTGTGCTCCTTAAGAACAGTGGTCCCTCCTTGCCCCTCTCCCAACGGCGCCACCGCACCGTGGCTGTCATTGGGCCCAATTCTAATGTCACTGTCACAATGATTGGCAACTATGCTGGTGTTGGTTGTGAGTACACGAGCCCCTTGCAAGGAATTGGGAGATACGCTAAGACTATTCACCGGCTCGGTTGTGCAAATGTGGCTTGTTCTGATGATAAGCAATTTGGGACGGCTCTAGATGCGGCCCGTCAAGCAGATGCGACTATTCTACTGATGGGACTGGACCAGTCAATTGAGGCCGAAACCGTGGACCGGGCTGGGTTGCTTCTTCCTGGGCATCAACAGGCCCTTGTGTCAAAGGTTGCGGCAGCTTCGAGAGGCCCAACAATTTTGGTCTTGATGTCTGGTGGGCCAGTGGATATAACTTTTGCAAAGAATGATCCGAAAATTGTGGGAATCTTGTGGGTTGGTTATCCGGGCCAAGCTGGTGGTGCAGCCATTGCAGATATCCTGTTTGGAGCTGCCAACCCAGGAGCCAAGCTTCCAATGACATGGTACCCTCAAGAGTACCTTAAAAATTTGCCAATGACAAATATGGCAATGCGTGCAAGTCGAACCACAGGGTACCCCGGAAGGACTTATCGATTTTACAATGGTCCAATGGTGTATCCATTTGGTTACGGATTATCATACACCCACTTTGTTCATAGATTAGCTAGTGCCCCCAAAGTGCTCTTAGTTCCTGTTGATGGACACCGCCATGGCAATAGCACGAACATCTCAAACAAGGCAATTAGAGTGACACATGCACGATGTGGCAAGCTCTCTGTTAACCTCCACGTTGACGTGCAAAATGTTGGATCTAGAGACGGCACTCACACATTGCTAGTTTTCTCAGCACCACCTGCAGGTAATGGCCATTGGGCACCACATAAGCAATTGGTGGCCTTTGAGAAAGTCCATGTTCCTGCTAAGGCTCAACAGCGGGTTCAAATCAATATTCATGTGTGCAAGCTCTTAAGTGTGGTTGACAGATCTGGGACAAGGAGAATTCCAATGGGGGTACACGATCTTCACATTGGTGATGTTAAACACTCTGTGTCGCTTCAAGCAAAAACATTTGGGATTATCAAGTCCTGA 1914 0.4953 MYNGGMAGLTYWSPNVNIFRDPRWGRGQETPGEDPLLAGRYAANYVRGLQGTDGIRLKVAASCKHFTAYDLDNWNGVDRFHFNAKVSKQDIEDTFDVPFRMCVKEGKVASVMCSYNQVNGVPTCADPNLLKRTVRGQWRLDGYIVSDCDSVGVFYTSQHYTSTPEEAAADAIKAGYLNVAGLDLDCGPFLAVHTQNAVQKGLVSEADVNGALVNTLTVQMRLGMFDGEPSAQPYGNLGPRDVCTPAHQELALEAARQGIVLLKNSGPSLPLSQRRHRTVAVIGPNSNVTVTMIGNYAGVGCEYTSPLQGIGRYAKTIHRLGCANVACSDDKQFGTALDAARQADATILLMGLDQSIEAETVDRAGLLLPGHQQALVSKVAAASRGPTILVLMSGGPVDITFAKNDPKIVGILWVGYPGQAGGAAIADILFGAANPGAKLPMTWYPQEYLKNLPMTNMAMRASRTTGYPGRTYRFYNGPMVYPFGYGLSYTHFVHRLASAPKVLLVPVDGHRHGNSTNISNKAIRVTHARCGKLSVNLHVDVQNVGSRDGTHTLLVFSAPPAGNGHWAPHKQLVAFEKVHVPAKAQQRVQINIHVCKLLSVVDRSGTRRIPMGVHDLHIGDVKHSVSLQAKTFGIIKS* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1995 637 Pfam Fibronectin type III-like domain 553 620 IPR026891 -
Dod06g1995 637 Gene3D Immunoglobulins 513 635 IPR013783 -
Dod06g1995 637 Gene3D - 244 490 IPR036881 GO:0004553|GO:0005975
Dod06g1995 637 SUPERFAMILY (Trans)glycosidases 10 258 IPR017853 -
Dod06g1995 637 PANTHER SUGAR HYDROLASE-RELATED 1 633 IPR044993 GO:0009044|GO:0045493
Dod06g1995 637 PANTHER ALPHA-L-ARABINOFURANOSIDASE/BETA-D-XYLOSIDASE 1 633 - -
Dod06g1995 637 SMART Fn3_like_2 551 622 IPR026891 -
Dod06g1995 637 Gene3D - 5 233 IPR036962 GO:0004553|GO:0005975
Dod06g1995 637 PRINTS Glycosyl hydrolase family 3 signature 59 75 IPR001764 GO:0004553|GO:0005975
Dod06g1995 637 PRINTS Glycosyl hydrolase family 3 signature 133 151 IPR001764 GO:0004553|GO:0005975
Dod06g1995 637 PRINTS Glycosyl hydrolase family 3 signature 23 39 IPR001764 GO:0004553|GO:0005975
Dod06g1995 637 Pfam Glycosyl hydrolase family 3 C-terminal domain 259 489 IPR002772 GO:0004553|GO:0005975
Dod06g1995 637 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 259 492 IPR036881 GO:0004553|GO:0005975
Dod06g1995 637 Pfam Glycosyl hydrolase family 3 N terminal domain 11 213 IPR001764 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1995 Dod-Chr6 31520553 31528119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1995 1 637 Glycoside Hydrolase AT1G02640 73.469 0.0 981
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1995 - - gmx:100798630 1155.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g1995 06 31520553 31528119 Dod06g1995 06 31520553 31528119 ECH
Dod01g3144 01 72337146 72343629 Dod06g1995 06 31520553 31528119 PCT