Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3144 ATGTTCCCTCCAGTCCATAACTTCCCGAGCCTCCATATCGGTTACATTTATTCCTCCCAGATGGCTTCCACATTCTCACCCTTCGCTACTGTCTTTCTCCTTCTCCTCATTTTGGGTGTAGTCCGGCACACCGGCGAGGCACGTGACCCGTTCGCATGTGACCCAAAAGATGGCAACACAAAGAACTTGCCGTTTTGCAGGGTGTCACTGGCGATACCGGAGAGGGTGAAGGACCTCATTGGGAGGTTGACGCTGCAGGAGAAGGTTAACTTGCTAGTGGACAATGCCGCAGCGGTTCCGAGGCTTGGGATCAAAGGGTATGAGTGGTGGTCTGAGGCACTCCATGGGGTCTCGAATGTGGGGCCCGGAACCAAGTTTGGTGGGCAGTTCCCTGGCGCTACTAGCTTCCCTCAAGTCATCACTACTGCTGCTTCCTTCAATGCATCTTTGTGGGAGGCCATTGGACAGGTTGTCTCGGACGAAGCAAGGGCAATGTACAACGGAGGAACAGCAGGACTAACATACTGGAGCCCAAATGTGAACATCTTTAGGGACCCAAGGTGGGGCCGTGGACAGGAAACTCCCGGTGAGGACCCTGTGCTAGCCGGTCGATATGCTGCTAGTTACGTCAGGGGCCTACAGGGAACAGATGGTGACCGGTTGAAGGTGGCTGCTTGTTGCAAACACTTTACCGCTTATGACCTTGATAATTGGAACGGTGTGGATCGCTTCCACTTTAACGCACAGGTCAGCAAGCAGGACATAGAGGACACATTTGATGTGCCATTTAGGATGTGTGTGAAGGAAGGCAAGGTAGCGAGCGTGATGTGCTCTTACAATCAGGTCAATGGGGTCCCCACATGTGCGGACCCCAAACTCCTAAAGAAAACTGTTCGTGGACAGTGGCGCCTTAATGGGTACATTGTATCGGACTGTGACTCTGTGGGGGTGTTTTACAGCAGCCAGCATTATACATCAACGCCAGAAGAAGCTGCTGCCGATGCCATTAAAGCAGGTTTGGATTTAGACTGTGGGCCCTTCCTAGGATTGCACACGCAGGATGCCGTCAAGAAAGGCTTGCTGAGTGAAGCTGAAGTGAATGGTGCTTTGGTGAATACGCTAACAGTCCAAATGAGGTTAGGGATGTTTGATGGCTCACCATCAGCCCAACCATATGGCAACTTGGGCCCAATAGATGTGTGTAACCCGGCTCACCAAGAGCTTGCACATGAGGCAGCCACACAAGGAATTGTACTCCTCAAGAATGATGGTCCCTCTTTGCCTCTCTCCCCAAGGCGTCACCGCAAGGTGGCAGTCATTGGGCCCAATTCTAATGTAACTGATACAATGATTGGCAATTATGCAGGCATTGCTTGTGGATATACCAGTCCCTTACAAGGAGTATCAAAACATGCCCAGACAATTCATCAGCTGGGTTGTGCCAATGTAGCTTGTACTGATGACAAGCAATTTGGGCCGGCTCTAGATGCAGCCCGTCAAGCAGATGCAACTGTTTTGATAATGGGCTTGGACCAGTCTATTGAGGCTGAAACTGTGGACAGGGCTGGCTTGCTTTTACCTGGGCGACAACAAGACCTAGTTTCTAAAGTGGCAGCTGCCTCAAGGGGACCAACTATCTTGGTCTTGATGTCTGGTGGGCCTGTGGACATCACTTTTGCAAAGAACGATCCCCATGTTGCTGGAATCTTATGGGCTGGCTATCCAGGCCAAGCTGGTGGTGCCGCCATTGCGGATATCTTGTTTGGAACTTCCAACCCAGGAGGTAAGTTACCTGTGACATGGTATCCACAAGAGTACCTTACAAACTTGCCAATGACAAACATGGCAATGAGACCAAACCCATCAGCAGGCTACCCGGGAAGAACGTATCGATTCTACAAGGGCCCAGTGGTGTATCCATTTGGGCACGGGTTAACCTACACCCATATTGTTCACACATTAGCTAGTGCGCCCAAAGTGGTTTCGGTTCCAGTGGATGGCCACCGCTATTCGGCCAATAGCACAAGCTTGTCAAGCAAGGCAATTAGAGTGACACATGCACGGTGTGGCAAGCTCTCCATCGCCCTTCAGGTTGACGTTAAAAATGTGGGGTCAAGAGACAGCGCTCACACGCTGTTGGTGTTCTCTGCTCCTCCTGCCGGTGGTGGCCAATGGGCTCCACAGAAGCAATTGGTGGGCTTTGAGAAGGTCCATGTTCCTGCCAAGGCCCAGCAGCGAGTCCAAATCCACATCCATGTGTGCAAGCTCCTAAGCGTAGTGGACAGGTTCGGGACTAGGAGAATCCCAATGGGGGAGCATAATCTTCACATTGGTGATGTTAAGCACCCTGTATCACTTCAAGCAGCAGCACTTGGGATTGTCAAGTCCTGA 2391 0.5148 MFPPVHNFPSLHIGYIYSSQMASTFSPFATVFLLLLILGVVRHTGEARDPFACDPKDGNTKNLPFCRVSLAIPERVKDLIGRLTLQEKVNLLVDNAAAVPRLGIKGYEWWSEALHGVSNVGPGTKFGGQFPGATSFPQVITTAASFNASLWEAIGQVVSDEARAMYNGGTAGLTYWSPNVNIFRDPRWGRGQETPGEDPVLAGRYAASYVRGLQGTDGDRLKVAACCKHFTAYDLDNWNGVDRFHFNAQVSKQDIEDTFDVPFRMCVKEGKVASVMCSYNQVNGVPTCADPKLLKKTVRGQWRLNGYIVSDCDSVGVFYSSQHYTSTPEEAAADAIKAGLDLDCGPFLGLHTQDAVKKGLLSEAEVNGALVNTLTVQMRLGMFDGSPSAQPYGNLGPIDVCNPAHQELAHEAATQGIVLLKNDGPSLPLSPRRHRKVAVIGPNSNVTDTMIGNYAGIACGYTSPLQGVSKHAQTIHQLGCANVACTDDKQFGPALDAARQADATVLIMGLDQSIEAETVDRAGLLLPGRQQDLVSKVAAASRGPTILVLMSGGPVDITFAKNDPHVAGILWAGYPGQAGGAAIADILFGTSNPGGKLPVTWYPQEYLTNLPMTNMAMRPNPSAGYPGRTYRFYKGPVVYPFGHGLTYTHIVHTLASAPKVVSVPVDGHRYSANSTSLSSKAIRVTHARCGKLSIALQVDVKNVGSRDSAHTLLVFSAPPAGGGQWAPQKQLVGFEKVHVPAKAQQRVQIHIHVCKLLSVVDRFGTRRIPMGEHNLHIGDVKHPVSLQAAALGIVKS* 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3144 796 SUPERFAMILY (Trans)glycosidases 63 416 IPR017853 -
Dod01g3144 796 Gene3D - 403 648 IPR036881 GO:0004553|GO:0005975
Dod01g3144 796 PRINTS Glycosyl hydrolase family 3 signature 297 315 IPR001764 GO:0004553|GO:0005975
Dod01g3144 796 PRINTS Glycosyl hydrolase family 3 signature 136 155 IPR001764 GO:0004553|GO:0005975
Dod01g3144 796 PRINTS Glycosyl hydrolase family 3 signature 223 239 IPR001764 GO:0004553|GO:0005975
Dod01g3144 796 Gene3D Immunoglobulins 672 792 IPR013783 -
Dod01g3144 796 Gene3D - 75 391 IPR036962 GO:0004553|GO:0005975
Dod01g3144 796 PANTHER SUGAR HYDROLASE-RELATED 23 791 IPR044993 GO:0009044|GO:0045493
Dod01g3144 796 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 417 649 IPR036881 GO:0004553|GO:0005975
Dod01g3144 796 PANTHER ALPHA-L-ARABINOFURANOSIDASE/BETA-D-XYLOSIDASE 23 791 - -
Dod01g3144 796 Pfam Glycosyl hydrolase family 3 C-terminal domain 417 647 IPR002772 GO:0004553|GO:0005975
Dod01g3144 796 Pfam Fibronectin type III-like domain 712 779 IPR026891 -
Dod01g3144 796 SMART Fn3_like_2 710 781 IPR026891 -
Dod01g3144 796 Pfam Glycosyl hydrolase family 3 N terminal domain 130 372 IPR001764 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3144 Dod-Chr1 72337146 72343629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3144 28 796 Glycoside Hydrolase AT1G02640 73.022 0.0 1181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3144 - - gmx:100789316 1352.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3144 01 72337146 72343629 Dod01g3144 01 72337146 72343629 ECH
Dod01g3144 01 72337146 72343629 Dod06g1995 06 31520553 31528119 PCT