Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1974 ATGGTTGTGCCTCCTCCAACTTCCATGATGATAAGAGCTAAGAGAACAAAGGCTGTGGGGATTCCAACTATTGACCTTTCTATGGAGAGGCCAGAGTTGTCAAAACAAGTAGTGAAAGCCTGCGAGGAGTACGGTTTCTTCAAGGTGGTGAACCACAGTGTGCCAAAAGAGGTTATTTCGAGATTGGAGGAGGAGGGAGCTGAGTTTTTCGCCAAACCCACCTCAGAGAAGCTCCAAGCTGGCCCTGCCACCCCTTTTGGTTATGGTTGCAGAAACATTGGCCCCAATGGAGATATGGGTGACCTCGAGTACGTCCTTCTTCATACCAATCCACTTACCATCTGTGAGAGATCCAAAACCATTGCAAACGACCCTGCCAAGTTCAGTTGTGTCGTAAATGACTATATAGAAGCAACTAAAGAATTGGCGTGTGAGATTCTTGATCTAGTGGCGGAGGGTTTATGGATCCCAGACAAGTTCTCACTGAGCAAGATAATCAGAGAGGTCCATGGTGACTCACTCCTCAGGATCAATCACTACCCTCCAATGAACCTGAAGGACAACAAGAGCGGGGACCCGTCGAAACTCGACCCACATCAATTCAAGAGCGACAATAATAGCAGCATAGGCTTTGGGGAACATTCTGACCCTCAGATCTTGACCATCCTACGGTCCAACAACGTCGGTGGCCTTCAGATCTCCACCCACGATGGGCTGTGGATCCCTGTCCCCCCTGACCCCAATGAATTCTTCGTCATGGTTGGAGATGCGCTCCAGGTCTTAACGAATGGAAGGTTTACAAGCGTTAGGCACAGAGCATTGACCAACCCAATGGAGCCTAGAATGTCAATGATGTACTTTGCAGCGCCACCACTGGATTGGTGGATCACTCCACTGCAGAAAATGGTGACACCCCACAAACCAAGTCTATACAAGCCCTTCACGTGGGCCCAATACAAGGAAGCAGCATACTCTCTCCGATTGGGAGACTCTCGCCTAGACCTCTTCAAGGTCCAAAAACAGCAACAAGATGGCCATCTCTCACCTGCATCTCCGTGA 1059 0.4939 MVVPPPTSMMIRAKRTKAVGIPTIDLSMERPELSKQVVKACEEYGFFKVVNHSVPKEVISRLEEEGAEFFAKPTSEKLQAGPATPFGYGCRNIGPNGDMGDLEYVLLHTNPLTICERSKTIANDPAKFSCVVNDYIEATKELACEILDLVAEGLWIPDKFSLSKIIREVHGDSLLRINHYPPMNLKDNKSGDPSKLDPHQFKSDNNSSIGFGEHSDPQILTILRSNNVGGLQISTHDGLWIPVPPDPNEFFVMVGDALQVLTNGRFTSVRHRALTNPMEPRMSMMYFAAPPLDWWITPLQKMVTPHKPSLYKPFTWAQYKEAAYSLRLGDSRLDLFKVQKQQQDGHLSPASP* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1974 352 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 170 290 IPR005123 -
Dod06g1974 352 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 7 339 - -
Dod06g1974 352 Gene3D - 3 327 IPR027443 -
Dod06g1974 352 MobiDBLite consensus disorder prediction 186 210 - -
Dod06g1974 352 SUPERFAMILY Clavaminate synthase-like 5 330 - -
Dod06g1974 352 Pfam 2OG-Fe(II) oxygenase superfamily 173 289 IPR044861 -
Dod06g1974 352 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 6 7 339 - -
Dod06g1974 352 PRINTS Isopenicillin N synthase signature 250 276 - -
Dod06g1974 352 PRINTS Isopenicillin N synthase signature 214 235 - -
Dod06g1974 352 PRINTS Isopenicillin N synthase signature 37 54 - -
Dod06g1974 352 Pfam non-haem dioxygenase in morphine synthesis N-terminal 21 85 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1974 Dod-Chr6 30062355 30068248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1974 5 338 Glycosyltransferase AT5G59530 27.684 1.44e-25 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1974 K04125 - gmx:100779525 584.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g1974 06 30062355 30068248 Dod06g1974 06 30062355 30068248 ECH
Dod01g3189 01 72739477 72745486 Dod06g1974 06 30062355 30068248 PCT