Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3189 ATGGCTGTGCCTTGTACAACTTCCATGACTATTGGGACCAAGAAAACAAAGGCAATGGGAATTCCAACGATTGACCTATCCATGGAAAGGTCAGAGTTGTCGGGAGTAGTGGTGAAAGCTTGCGAGGAATACGGCATCTTCAAGGTGGTGAACCACAGTGTTCCAAGAGAGGTGATTTCGAGATTGGAAGAGGAAGGGGCTGAGTTCTTCGCCAAGCCCACATCGGAGAAGCGTCAAGCTGGCCCACCCACTCCTTTCGGTTATGGCTTCAAAAACATTGGCTTCAATGGTGATGTGGGTCACCTCGAGTATCTCCTACTTCGCACCAATCCTGTTTCCATCTCTGAGGCTTCCCAAACCATCTCAAATGACCCAACCAAGTTCAGTGGTGCTGTGAATGATTATATAGAAGGAGCTAAAGTACTAGCATGTGAGATTCTTGATCTGGTGGCGGAGGGTCTGGGGGTCCCGGACAAGTTTGCACTTAGCAAGCTCATCAAAGATGTGCACAGTGACTCAGTGCTGAGGATCAATCACTATCCTCCTCCTCCATCCAGGAACAGTATGAAGAATTGGGATTGGGACCCATCATCAAAACTTACGAGCAATAATAATAGCATTGGCTTTGGGGAGCATTCTGACCCTCAGATCTTGACCATCATGCGGTCCAACGACGTCAGCGGCCTTCAGATCTCCACCCACGAAGGGTTGTGGATCCCTGTCCCCCCTGACCCCAATCAATTCTTCGTCATGGTTGGTGATGCCCTCCAGGTCTTGACAAATGGAAAGTTTATGAGCGTGAGACATAGAGCATTGACTAACAAATTGAACGCAAGGATGTCAATGATGTACTTTGGAGCACCACCGCTGAATTGGTGGATCACTCCGCTGCCGGAGATGGTGTCGCTGCCCCAAAATCCAAGTCTGTATAAGCCCTTTACGTGGGGTCAGTACAAGCAAGCAGCATACTCTCTCAGACTCGGAGACTCTCGGCTTGACCACTTTAAGGCCCAGCATGCATGA 1023 0.4936 MAVPCTTSMTIGTKKTKAMGIPTIDLSMERSELSGVVVKACEEYGIFKVVNHSVPREVISRLEEEGAEFFAKPTSEKRQAGPPTPFGYGFKNIGFNGDVGHLEYLLLRTNPVSISEASQTISNDPTKFSGAVNDYIEGAKVLACEILDLVAEGLGVPDKFALSKLIKDVHSDSVLRINHYPPPPSRNSMKNWDWDPSSKLTSNNNSIGFGEHSDPQILTIMRSNDVSGLQISTHEGLWIPVPPDPNQFFVMVGDALQVLTNGKFMSVRHRALTNKLNARMSMMYFGAPPLNWWITPLPEMVSLPQNPSLYKPFTWGQYKQAAYSLRLGDSRLDHFKAQHA* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3189 340 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 6 337 - -
Dod01g3189 340 PRINTS Isopenicillin N synthase signature 37 54 - -
Dod01g3189 340 PRINTS Isopenicillin N synthase signature 212 233 - -
Dod01g3189 340 PRINTS Isopenicillin N synthase signature 248 274 - -
Dod01g3189 340 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 170 296 IPR005123 -
Dod01g3189 340 Pfam 2OG-Fe(II) oxygenase superfamily 172 286 IPR044861 -
Dod01g3189 340 Pfam non-haem dioxygenase in morphine synthesis N-terminal 21 83 IPR026992 -
Dod01g3189 340 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 6 6 337 - -
Dod01g3189 340 Gene3D - 3 326 IPR027443 -
Dod01g3189 340 SUPERFAMILY Clavaminate synthase-like 8 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3189 Dod-Chr1 72739477 72745486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3189 14 336 Glycosyltransferase AT5G59530 28.274 2.86e-26 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3189 K04125 - gmx:100779525 525.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3189 01 72739477 72745486 Dod01g3189 01 72739477 72745486 ECH
Dod01g3189 01 72739477 72745486 Dod06g1974 06 30062355 30068248 PCT