Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1941 ATGGCATGCTCATTCTCCTCCAATGGTATCTTCATAATGTGCTTCGCAGTTCTGCTCTATTCTGCATCTTTGGGTGCTGAGGCTCGTGGCTCACCCATTACGCCCATCTCATCTCTCATTAGCAAAAAGCTTTTTGACTCCATTTTCCTGCACAAAGATGACACTGCATGCCCTGCCAAAGACTTCTATACCTACGATTCCTTCGTTCAGGCAACCATATGCTTCCCTAGATTTGGCACAACTGGCAGTTTAACCACACGCAAGCGTGAGATTGCAGCTTTTCTTGCTCAAATATCCCATGAAACCACTGGTGGTTGGGCCACTGCACCTGATGGACCTTATGCTTGGGGATTGTGCTTCAAGGAAGAAGTTAGTCCTCAAAGTGACTACTGTGATTCCACAAACAAAGAATGGCCTTGCTACCCAGGAAAGAGCTACAAAGGCAGAGGACCAATTCAACTTTCCTGGAACTACAACTATGGGCCAGCAGGGAAGGCCTTGGGATTTGATGGACTGAGGAACCCGGATATTGTGTCAAACAATTCATTGATTGCCTTCAAAACAGCTCTCTGGTTTTGGATGACCGAGCGAAAGCCAAAGCCTTCTTGCCACAATGTGATGGTTGGAAAGTATGCGCCGACAGCGGCTGACATAGCAGCTAATAGAACTGCTGGGTTTGGCTTGGTGACTAACATAATCAATGGTGGACTTGAGTGTGGAATTCCTGATGATGCAAGAGTGAATGATAGAATTGGGTTCTTTAAAAGATATGCCACTTTGTTTAACGTAGATCCTGGATCTAACTTGGATTGTGCATATCAGAAATCCTTCTAA 834 0.4544 MACSFSSNGIFIMCFAVLLYSASLGAEARGSPITPISSLISKKLFDSIFLHKDDTACPAKDFYTYDSFVQATICFPRFGTTGSLTTRKREIAAFLAQISHETTGGWATAPDGPYAWGLCFKEEVSPQSDYCDSTNKEWPCYPGKSYKGRGPIQLSWNYNYGPAGKALGFDGLRNPDIVSNNSLIAFKTALWFWMTERKPKPSCHNVMVGKYAPTAADIAANRTAGFGLVTNIINGGLECGIPDDARVNDRIGFFKRYATLFNVDPGSNLDCAYQKSF* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1941 277 ProSitePatterns Chitinases family 19 signature 1. 57 79 IPR000726 GO:0004568|GO:0006032|GO:0016998
Dod06g1941 277 SUPERFAMILY Lysozyme-like 36 277 IPR023346 -
Dod06g1941 277 PIRSF Endochitinase 6 277 IPR016283 GO:0004568|GO:0005975
Dod06g1941 277 Gene3D Endochitinase, domain 2 122 180 - -
Dod06g1941 277 PANTHER CHITINASE-RELATED 12 277 - -
Dod06g1941 277 Pfam Chitinase class I 39 271 IPR000726 GO:0004568|GO:0006032|GO:0016998
Dod06g1941 277 CDD chitinase_GH19 40 271 - -
Dod06g1941 277 Gene3D - 43 277 - -
Dod06g1941 277 ProSitePatterns Chitinases family 19 signature 2. 184 194 IPR000726 GO:0004568|GO:0006032|GO:0016998
Dod06g1941 277 PANTHER CHITINASE 10 12 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1941 Dod-Chr6 28794693 28797221 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1941 11 277 Glycoside Hydrolase AT1G02360 70.412 1.42e-144 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1941 - - gmx:100785397 483.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g1941 06 28794693 28797221 Dod06g1941 06 28794693 28797221 ECH
Dod01g3227 01 73207205 73208284 Dod06g1941 06 28794693 28797221 PCT