Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3227 ATGTTCCTGCACAAAGATGACAATGCATGCCCTGCTAAAAAATTCTACCCCTACAAGTCTTTCATTCGTGCAGCCAAAAGCTTTCCTGAGTTTGGTACTACGGGTTGTTTAACCACACGCAAGGGTGAGATTGCTGCATTTCTTGCTCAGATTTCCCATGAAACCACTGGTGGATGGGCTACTGCACCTGACGGTCCATATGCTTGGGGCTTGTGCTTCAAGGAAGAGATCAACCCTCCAAGTAACTACTGTGATTCCACTAACAAAGAATGGCCTTGTTACCCTGACAAGAGTTACAAAGGAAGAGGACCCATCCAACTTTCTTGGAACTTCAACTATGGCCCAGCAGGGAAGGCCTTGGGATTTGATGGGCTCAGGAACCCGGAGATTGTGGCCAACAATTCTGTGATTGCGTTCAAAACTGCACTGTGGTTTTGGATGACAGAGGGAAAGGGAATACCTTCTTGCCACGACGTGATGGTTGGGAACTATGTGCCAACGGCAGCAGATATAGCAGCTAATAGAACAGCAGGGTATGGCTTGGTGACTAACCTAATCAATGGTGCACTGGAATGTGGAATTCCTGATGATCCAAGAGTGAATGATAGGATTGGATTTTTCAAAAGATATGCCAAATTGTTCAACGTGGATACTGGACCTAACTTGGATTGTGCTAATCAGAAACCCTTCTAA 693 0.4574 MFLHKDDNACPAKKFYPYKSFIRAAKSFPEFGTTGCLTTRKGEIAAFLAQISHETTGGWATAPDGPYAWGLCFKEEINPPSNYCDSTNKEWPCYPDKSYKGRGPIQLSWNFNYGPAGKALGFDGLRNPEIVANNSVIAFKTALWFWMTEGKGIPSCHDVMVGNYVPTAADIAANRTAGYGLVTNLINGALECGIPDDPRVNDRIGFFKRYAKLFNVDTGPNLDCANQKPF* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3227 230 ProSitePatterns Chitinases family 19 signature 2. 137 147 IPR000726 GO:0004568|GO:0006032|GO:0016998
Dod01g3227 230 PIRSF Endochitinase 1 230 IPR016283 GO:0004568|GO:0005975
Dod01g3227 230 Gene3D Endochitinase, domain 2 75 133 - -
Dod01g3227 230 PANTHER CHITINASE-RELATED 1 230 - -
Dod01g3227 230 Pfam Chitinase class I 1 224 IPR000726 GO:0004568|GO:0006032|GO:0016998
Dod01g3227 230 Gene3D - 1 230 - -
Dod01g3227 230 CDD chitinase_GH19 1 224 - -
Dod01g3227 230 PANTHER OS05G0138200 PROTEIN 1 230 - -
Dod01g3227 230 SUPERFAMILY Lysozyme-like 1 230 IPR023346 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3227 Dod-Chr1 73207205 73208284 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3227 1 230 Glycoside Hydrolase AT4G01700 74.783 1.35e-135 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3227 - - gmx:100784196 432.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3227 01 73207205 73208284 Dod06g1941 06 28794693 28797221 PCT