Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1901 ATGAAGCCCACAAACACACTGCTTCTGGTAACTCTTGCTCTGGTGTTAACCACCGCAATCTCATCAGATCCTGACCCTCTTCAAGACCTCTGTGTCGCTGATCTTGCCTCAGCTGTGATAGTGAATGGCTTCACCTGCAAAAACGCAAGCAAGGTAAGCGCCACCGATTTCTTCACCAACATACTATCGAAGCCAGGGGCCACAAGCAAGACATTCGGGTCAGTGGTGACTGGAGCCAACGTTGAGAAGATCCCAGGGCTCAACACCCTTGGTGTCTCGCTCGCAAGGATTGACTATGCCCCTGGCGGGCTCAACCCACCCCACACCCACCCACGTGCCACCGAGATCGTGTTCGTCCTTGAAGGGCAGCTAGATGTTGGGTTCATCACCACAGCCAATGTTCTCTTTTCAAAGACCATCAGCGTGGGTGAGGTGTTTGTGTTCCCAAGAGGGTTGGTTCATTTCCAAAAGAACAATGGGTATGTGCCTGCTGCTGTGATCTCTGCTTTCAACAGCCAACTCCCTGGGACACAGTCCATTGCTGCCACCTTGTTTGGTGCCACGCCACCTGTTCCGGACAATGTGCTCGCCAAGGCATTCCAAGTGAGTACCCAGGAGGTTGACCAAATCAAGTCCAAGCTTGCACCAAAGAATTAA 657 0.5236 MKPTNTLLLVTLALVLTTAISSDPDPLQDLCVADLASAVIVNGFTCKNASKVSATDFFTNILSKPGATSKTFGSVVTGANVEKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLEGQLDVGFITTANVLFSKTISVGEVFVFPRGLVHFQKNNGYVPAAVISAFNSQLPGTQSIAATLFGATPPVPDNVLAKAFQVSTQEVDQIKSKLAPKN* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1901 218 SUPERFAMILY RmlC-like cupins 23 214 IPR011051 -
Dod06g1901 218 SMART Cupin_1_3 59 208 IPR006045 -
Dod06g1901 218 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 14 215 - -
Dod06g1901 218 ProSitePatterns Germin family signature. 103 116 IPR019780 GO:0030145
Dod06g1901 218 PRINTS Germin signature 171 186 IPR001929 GO:0030145
Dod06g1901 218 PRINTS Germin signature 138 158 IPR001929 GO:0030145
Dod06g1901 218 PRINTS Germin signature 108 128 IPR001929 GO:0030145
Dod06g1901 218 Pfam Cupin 62 207 IPR006045 -
Dod06g1901 218 Gene3D Jelly Rolls 22 217 IPR014710 -
Dod06g1901 218 PANTHER OS01G0249200 PROTEIN 14 215 - -
Dod06g1901 218 CDD cupin_OxOx 23 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1901 Dod-Chr6 27755651 27758080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1901 8 217 Miscellaneous Gene Families AT3G05930 54.502 8.99e-82 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1901 - - gmx:100302722 342.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3255 01 73584590 73587087 Dod06g1901 06 27755651 27758080 PCT