Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1882 ATGATAGAAGACAGCATTAATGGGGAACTAAGCATGGGGGATCACTTTGTTCAGTCTATAATCAAACGCGCCACTCTTGCTGCTTCTATCCTTCCTTCCAAAGATGTCCCTATAGTTCTCACAATCAAGAGCCAAGTTATACCCAGTTCAGGGGAAGTAGCTCAATTTAGTGATAGGGTATCCAAATATCTAGAAGCCAGAACTGAGATTACAAAAAGAATAGTTGCATTATATGCAGAAGTACCCACAACAGAAGATTTTGAACAGAAAGAGCTCAAAAGGGAAGAGGATGAGGAACTATTTCCCGTGTCTCGCAGGGTAATCCTAACCAAATCTCACCAGAGAAGAACTCTGGCTGATACAACCAACCCACCAAACACAGTTTCACCTACAAATCCAGCATCAGGCACACCAATCATAACAACACCAGATACACCAACCATAATCACAGTCCCTTCCACTAATCCTGTCACAATTTCTCCCTCAAATCCAGCTACAATGCCAGTGACAATTCCCTCTACAACACCTGTGCCTTTACCTCCCACAAATCCAGCAAATTCACCAGTACCAGTAACAAATCCAGCTACAACTCCCAACACAGTTCCAGGGACACAACCAGCAACCAACCCTGTTACATCTTATCCGCCCCCATCAGGAAGTGTTCCTGTTGTAAACCCGCAACCGCCTCCTGCAACCGCAAATACTCCTCCTGCCACACAGGGCCAAAGTTGGTGTGTGGCAAAGAACGGAGCCCCGGAAAGTTCTCTTCAGGCAGCACTGGACTATGCTTGTGGAACGGCAGGCGCAGATTGTTCTCAAATACAGCAGGGTGGGAGTTGTTACAACCCAGTTAGTTTGCAAAACCATGCTTCTTATGCCTTCAACAGCTACTACCAGAAGCATCCTGCTCCAACAAGCTGTGTCTTTGGAGGAACTGCCACCTTAGTTAACACCAATCCAAGCTCCGGGTCTTGCATTTTCCCATCATCATCAACACCAACTTCATCATCCCCAACAACACCTACACCATCAGTTTCAACACCACCACCAAGTCCTACAAATTCTCCGCCATCAACTCCAACAACACCACCTACACCATCAGTACCAACAGCACCACCAACAACATCATCAACTCCAGGATCAGGCACTTCAGGGAATAGTACCCCACCTTCAGTACTGAATTCAAGCAACCCAGCATCATCAGGGACAATGCCAACAGGTTTTGGGTTCCAAGCTCCTCCTGAAGTAAATACCACATCATCCTCACATTCAGTTACTCAGAGACCTCTTTTTGGCTACATCGTTCTGATAATATCATTTGTCACTGTAAGACTCAGTTTGCGCCCTTAG 1350 0.4615 MIEDSINGELSMGDHFVQSIIKRATLAASILPSKDVPIVLTIKSQVIPSSGEVAQFSDRVSKYLEARTEITKRIVALYAEVPTTEDFEQKELKREEDEELFPVSRRVILTKSHQRRTLADTTNPPNTVSPTNPASGTPIITTPDTPTIITVPSTNPVTISPSNPATMPVTIPSTTPVPLPPTNPANSPVPVTNPATTPNTVPGTQPATNPVTSYPPPSGSVPVVNPQPPPATANTPPATQGQSWCVAKNGAPESSLQAALDYACGTAGADCSQIQQGGSCYNPVSLQNHASYAFNSYYQKHPAPTSCVFGGTATLVNTNPSSGSCIFPSSSTPTSSSPTTPTPSVSTPPPSPTNSPPSTPTTPPTPSVPTAPPTTSSTPGSGTSGNSTPPSVLNSSNPASSGTMPTGFGFQAPPEVNTTSSSHSVTQRPLFGYIVLIISFVTVRLSLRP* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1882 449 MobiDBLite consensus disorder prediction 209 235 - -
Dod06g1882 449 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 10 412 IPR044965 GO:0004553|GO:0005975
Dod06g1882 449 Gene3D - 238 337 - -
Dod06g1882 449 SMART X8_cls 243 327 IPR012946 -
Dod06g1882 449 MobiDBLite consensus disorder prediction 326 423 - -
Dod06g1882 449 MobiDBLite consensus disorder prediction 342 373 - -
Dod06g1882 449 PANTHER CARBOHYDRATE-BINDING X8 DOMAIN PROTEIN 10 412 - -
Dod06g1882 449 Pfam X8 domain 244 314 IPR012946 -
Dod06g1882 449 MobiDBLite consensus disorder prediction 116 148 - -
Dod06g1882 449 MobiDBLite consensus disorder prediction 374 423 - -
Dod06g1882 449 MobiDBLite consensus disorder prediction 189 208 - -
Dod06g1882 449 MobiDBLite consensus disorder prediction 175 239 - -
Dod06g1882 449 MobiDBLite consensus disorder prediction 326 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1882 Dod-Chr6 27214593 27216336 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1882 228 330 Glycoside Hydrolase AT2G05790 50.000 3.53e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1882 - - cam:101499863 448.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g1882 06 27214593 27216336 Dod06g1882 06 27214593 27216336 ECH
Dod01g3274 01 73773541 73776699 Dod06g1882 06 27214593 27216336 PCT