Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3274 ATGGCCAAGGAACCATTTATGTGCTTCTTTTTCCTCTATTTTCTCATTGTCTGCTGTTCTGGTGCACTGGTGGGGTTTTCTTATCGTGACAGAGAAGACACTGCATCTCCAACCACTGCTGGACCCACATTCCTCCAGAAAAACAAGATCTCCCAAACTAGGATTCGGTTGTTTGTAACAGATCATAAGATTTTGAGCACTCTGACCAACTATGATGTACCAGTTGATTTCTTCTTGAACAGAAGCCTAGTTGAAGATTTTGTTACTAAAAAACCATCTGGGGTTTCATGGCTAAAGGCTCATGTAGTAAGTTTTCTTCCACAAGTAGACATCAGAAGCATCATTTTTAGTTGTGGCAGTGAGTGCTTAGGCCAAAATGAGATACCTTTACTGCTATCTACTCTCAGATCATTTCATTCGGTTCTAAGCAATCTTCAAATAAATAGGGAGGTAAAAGTCTCAGTATCATTTCCACTGTCATTCTTGGAGAAGCTGAATGCATCACATGAAAATGATCTTCTTAGGATTCTTCGGTTTATAGAGAAAATAGATTCCTTTATCATGATAGAAGACAGCATTGATGGGGAGTTAAGCATGGGGGATCACTTTGTTCAGCATGTTATTGAACGAGTCGCCCTTGCTGCTTCTATTCTTCCTTGCAAAGATGTTCCCATGGTTCTGACAATCAAGAACAGGGCTATTCCCAGTCCAAAGAAATTAGCTCTATTTAATGAGGGTTTATCCCAATATCTTGAACCAAGTTCTCTGATTACAAAAAGAATAGTGGCATTATATGCAGAAGTGCACACGGCTGATGATGAAGATGTTGCACAAAAAGAGCATAAAATGGAAGAGGAAGAGATATTTCCTTTGTCCCAAAGAGAAGCAAAAAACAAAGTTCATATCAGAAGAACACTAGATGAGACAAACAACTCACCTACCCCAGTTTTCCCCACGAACCCAACATCAACTACACCAGTCAGCACACCTCCAGATACTCCTGCAATCATCACAGTTCCTTCCACAAGTCCTGTCACAGTTTCACCACCCAATCCAACTACAGCGCCTATAACAGTTCCCTCTTCCACACCTGTGACCTCACCCCCCACAAATCCAGCCAATTCACCTGTACCAGTGACCAACCCATCTACAAGTCCCATCACCAACCCTGCGGCTTCTTATCCACCTCCATCATCTGGAAGTGTTCCTGTCACAAACCCCCTTTCTCCTCCTGCAAGCACAAATGCTCCAGCTACTCAAGGTCAGAGCTGGTGTGTAGCAAAGAGTGGAGTTTCAGAGACTGCTCTTCAATCAGCACTAGACTATGCTTGTGGAATGGGAACTGTAGATTGTTCACAGATCCAGCAAGGTGGGAGTTGTTACAATCCAAATTCCATACAAAACCATGCTTCTTTTGCCTTCAACAGCTACTACCAAAAGAATCCAGCACAAACAAGCTGTGACTTTGGAGGGACTGCTACCATAGTTACCACCAATCCAAGCACGGGTTCTTGCATTTACCCATCATCATCTTCAGCAGCAGGTACATCCGGCACTGGTGCCCCATCTTCAGATTTTGGGTCCCAAAGCCCTCCTGATGTAAATTCCTCACATTCAGCTGGTCTGAGACCTTTACTTGGCTGCATGGTTTTGGTTGTATCATTGGTCACTGGAAGTCTCAGCATGAACCAATAG 1695 0.433 MAKEPFMCFFFLYFLIVCCSGALVGFSYRDREDTASPTTAGPTFLQKNKISQTRIRLFVTDHKILSTLTNYDVPVDFFLNRSLVEDFVTKKPSGVSWLKAHVVSFLPQVDIRSIIFSCGSECLGQNEIPLLLSTLRSFHSVLSNLQINREVKVSVSFPLSFLEKLNASHENDLLRILRFIEKIDSFIMIEDSIDGELSMGDHFVQHVIERVALAASILPCKDVPMVLTIKNRAIPSPKKLALFNEGLSQYLEPSSLITKRIVALYAEVHTADDEDVAQKEHKMEEEEIFPLSQREAKNKVHIRRTLDETNNSPTPVFPTNPTSTTPVSTPPDTPAIITVPSTSPVTVSPPNPTTAPITVPSSTPVTSPPTNPANSPVPVTNPSTSPITNPAASYPPPSSGSVPVTNPLSPPASTNAPATQGQSWCVAKSGVSETALQSALDYACGMGTVDCSQIQQGGSCYNPNSIQNHASFAFNSYYQKNPAQTSCDFGGTATIVTTNPSTGSCIYPSSSSAAGTSGTGAPSSDFGSQSPPDVNSSHSAGLRPLLGCMVLVVSLVTGSLSMNQ* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3274 564 MobiDBLite consensus disorder prediction 516 538 - -
Dod01g3274 564 Gene3D - 418 517 - -
Dod01g3274 564 MobiDBLite consensus disorder prediction 345 376 - -
Dod01g3274 564 SMART X8_cls 423 507 IPR012946 -
Dod01g3274 564 MobiDBLite consensus disorder prediction 304 419 - -
Dod01g3274 564 MobiDBLite consensus disorder prediction 516 537 - -
Dod01g3274 564 MobiDBLite consensus disorder prediction 405 419 - -
Dod01g3274 564 MobiDBLite consensus disorder prediction 329 344 - -
Dod01g3274 564 MobiDBLite consensus disorder prediction 307 323 - -
Dod01g3274 564 Gene3D Glycosidases 24 191 - -
Dod01g3274 564 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 148 525 IPR044965 GO:0004553|GO:0005975
Dod01g3274 564 MobiDBLite consensus disorder prediction 389 404 - -
Dod01g3274 564 Pfam X8 domain 424 494 IPR012946 -
Dod01g3274 564 PANTHER CARBOHYDRATE-BINDING X8 DOMAIN PROTEIN 148 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3274 Dod-Chr1 73773541 73776699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3274 53 510 Glycoside Hydrolase AT2G05790 26.327 1.73e-33 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3274 - - gmx:100809473 577.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3274 01 73773541 73776699 Dod01g3274 01 73773541 73776699 ECH
Dod01g3274 01 73773541 73776699 Dod06g1882 06 27214593 27216336 PCT