Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1850 ATGGCATGGAGCAAGCTTGCTACCACAGGTGAAAATCCAGGACCTAGAGACAGCCATAGTGCAGCTCTTGTTGGGAACAAAATGATAGTGTTTGGTGGTACAAATGGCTTCAAGAAGGTGAATGATATTCACATACTGGACCTTGTCACCAAGGAGTGGATTCGTCCAATGTGTCAAGGGACTCCTCCTTCTCCAAGGGAAAGTCACACTGCCACTCTAGTTGGTGATGAAAGACTAGTGATCTTTGGTGGCAGTGGTGAAGGTGATGCAAATTACCTAAATGATTTGCATATTCTAGACCTTAGAACCATGAGGTGGACTTCTCCTGTGTTGGAAGGTGATTTTCCTGTCCCTAGGGACAGCCACACAACTCTTGCTATTGGGAACAAGCTTGTTGTGTATGGTGGAGACTGTGGTGATCAGTATCATGGAGATGTTAGTGTGCTTGATATGGACACAATGACTTGGTCAAAGTTGAAAATTCAAGGTTCTTCACCAGGGGTAAGGGCAGGTCATGCCGCAGTGAACATTGGAACCAAGGTGTACATCATTGGAGGGGTAGGAGATAAGCGTTACTATAATGACATCTGGGTCTTTGATGTCTGCACTTGTTCGTGGACTCAACTCGATATACGTGGTCAACAGCCACAAGGGCGGTTTTCTCATACAGCAGTGGTTGCAGACATGGATATTGCCATATATGGCGGCAGGTGTGGGGAAGATGAACGTCCTCTGAATGAATTGTTAGTGTTGCAGCTTGGAGCAGAGCATCCGAATGGACGATACAACATTTCCATGTGCAAAGTTTTTGGAACTTACTGGAACCAAGAAAAGAGGACTATCCCGGAAGGAGCAGCTACCAACTCGCAGAAAACTCCATGCATGGGAAACAACAGAGTGGAAGTTTCAGGAAACTGTGCTTATGAAGTTGTATCAGAAAAGTTACAACATTATCAATTCGATTCAGGTACCTCACAGCAGAAGAGAAGAAGAATAGCTGCTGTAAAGGTCTGGGATGTCGAATCAGAACAAGAAGAGCATTCGCTTTCACTGTCCCAGCATTCATCTCCATCTCAATCTGATCAAGAACAGACGCCAGGACAAAAAGCGAATGCTTCTGTCCTGGATTCTCAGCGGTATCACTTGTTCAAACAGATCAATAAAATTCCAAGCAATTGCCAAGTTGACAATGGCTCAAGTAATAAGAGAGCTTTGAATAATATCATACAAACAAGTCCACAAGATCTTCATCTCCTAGAGCACCAACCAAAACAAGAACAGTTTGTTCATGTTCATGAGGATAGAAAAGGAACTCAATACCAAGCTGCAGAGCAGAAGCCAGTAAAGCGAGGACATGCTCAACACCTGATCGGTGCTGAAGTTCGAGGGAAAGTGGATGGGGCATTTGATTCAGGGTTGCTGATGACTGCAACTGTGAATGGAATGATTTTCAGAGGAGTCTTGTTTGCACCTGGAGCAGGAGTCTTCTCCACCAGTGTTGAGCCAAATTGTTCTTTGTCATGTTCATTTCCCTCCACTCAAACATTCATGAACTCAAACCAAGTGGACAATTTGAGGGATTCCCAGCAGGTAACTAACAGTTCACGTGCAAATTCTTGTAATGGCTCAAGGCAAGCTATAATCGCCAGACCATTTCCAATCATGAGAGGAACTGCTGCATCTTTAGCCAAAGAGCATAAAATCAGGAGTGACCTTCAAGGATTGGCTTTGACACTTGGAGGGCCTGCAAGTGGCAATCATGCTGGATCCTAA 1773 0.4461 MAWSKLATTGENPGPRDSHSAALVGNKMIVFGGTNGFKKVNDIHILDLVTKEWIRPMCQGTPPSPRESHTATLVGDERLVIFGGSGEGDANYLNDLHILDLRTMRWTSPVLEGDFPVPRDSHTTLAIGNKLVVYGGDCGDQYHGDVSVLDMDTMTWSKLKIQGSSPGVRAGHAAVNIGTKVYIIGGVGDKRYYNDIWVFDVCTCSWTQLDIRGQQPQGRFSHTAVVADMDIAIYGGRCGEDERPLNELLVLQLGAEHPNGRYNISMCKVFGTYWNQEKRTIPEGAATNSQKTPCMGNNRVEVSGNCAYEVVSEKLQHYQFDSGTSQQKRRRIAAVKVWDVESEQEEHSLSLSQHSSPSQSDQEQTPGQKANASVLDSQRYHLFKQINKIPSNCQVDNGSSNKRALNNIIQTSPQDLHLLEHQPKQEQFVHVHEDRKGTQYQAAEQKPVKRGHAQHLIGAEVRGKVDGAFDSGLLMTATVNGMIFRGVLFAPGAGVFSTSVEPNCSLSCSFPSTQTFMNSNQVDNLRDSQQVTNSSRANSCNGSRQAIIARPFPIMRGTAASLAKEHKIRSDLQGLALTLGGPASGNHAGS* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1850 590 Pfam Kelch motif 15 53 - -
Dod06g1850 590 Pfam Kelch motif 118 159 - -
Dod06g1850 590 PANTHER KELCH REPEAT DOMAIN 1 586 - -
Dod06g1850 590 MobiDBLite consensus disorder prediction 345 372 - -
Dod06g1850 590 SUPERFAMILY Kelch motif 3 253 IPR015915 GO:0005515
Dod06g1850 590 Gene3D - 111 291 IPR015915 GO:0005515
Dod06g1850 590 Pfam Galactose oxidase, central domain 169 216 - -
Dod06g1850 590 Pfam Galactose oxidase, central domain 65 107 - -
Dod06g1850 590 Gene3D - 1 110 IPR015915 GO:0005515
Dod06g1850 590 PANTHER OS01G0300900 PROTEIN 1 586 - -
Dod06g1850 590 MobiDBLite consensus disorder prediction 349 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1850 Dod-Chr6 26608552 26611758 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1850 3 253 Acyl Lipid Metabolism Gene Families AT3G05420 29.658 2.79e-28 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1850 K20285 - gmx:100801275 934.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g1850 06 26608552 26611758 Dod06g1850 06 26608552 26611758 ECH
Dod01g3299 01 74059795 74064204 Dod06g1850 06 26608552 26611758 PCT