Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g3299 ATGGGTTCTGTGGTAGCTGAAGTTGCGAAGAAGAGAGCAATGTGGTTGTATCCAAAGGTTTTGGGTTTCAACCCTTCTGAAAGATGGGGGCACTCTGCTTGCTTCTCCAAGGGGTTTATGTATGTCTTTGGGGGCTGTTGTGGGGGACTGCATTTTAGCGATGTTCTCACTTTGGACCTTGAAAAAATGGTTTGGAGCAAGCTTGCTACAACGGGTGAAAAGCCAGGTCCTAGGGACAGCCATAGTGCAGTTATTGTAGGGAATATAATGATAGTGTTTGGTGGCACAAATGGGTTCAAGAAGGTGAATCATATTCATATGCTTGATCTTGTAACCAAAGAGTGGGTTCATCCTGAATGCCAAGGGACACCTCCTTCCCCACGGGAAAGCCACACTGCCACGCTCATTGGGAATGAAAGGCTAGTGATTTTTGGTGGTAGTGGAGAAGGTGATGCAAACTATTTGAATGATTTGCATATTCTTGATCTTCGAACCATGAGATGGACTTGTCCTGTGTTGAAAGGTGATTTGCCTGTTCCTAGGGACAGTCACAGTACCCTTGCAGTTGGGAACAGCAAGCTTATTGTTTATGGTGGAGACTCAGGGGACCAATATCATGGCAATGTTAATATGCTTGATATGGAAACAATGACTTGGTCCAAGTTGAAAATTCAAGGTTCTTCACCTGGAGTCAGGGCAGGTCATGCTGCAGTGAACATTGGAACTAAGGTCTATATCATTGGAGGGGTTGGAGATAAACGCTACTATAATGACATTTGGATCTTTGATATCTACACTTGTTCATGGACTCAACTTGATGTACCTGGTAAACAACCACAAGGGCGATTTTCTCATACGGCTGTTGTTGTAGACATGGATATTGCCGTGTATGGCGGGTGCGGGGAAGATGAACGCCCTCTCAATGAATTGTTAGTGTTGCAGCATGGAGCAGAGCATCCAAATGGACGCTACAACACTTCCATGTGCAAGGTTTTTGGAACTTACTGGAATCAAGAAAAGAAGAATATCACAGGAGGAGCAGATACCAACTCGGAAGCTACGCTCAAGGGGGGTAATGTAGAGGTTTTAGGGAAAGAGGTTTTTGAAGTTGTATCAGAAAAAGCATTGCCTTATCACTTTGATTCAGGTACTTCACAACAGAAGAGGAGGAGAATTGCTGCTATGAAGGTTTGGGATGTTGATTCAGAACAAGAAGAACATTCTCTTTCATTGTCACAGCATTCATCTCCATCTCAATCTGATCAAGAACAGACTCTTGGTCAAAAAACAAATGCTTCTGTCATGGATTCACAGCAGTGTCTTGTATTCAAACAGATCAATCAAATTCCAAGCAATTGCCAACACGACAATGGCTCAAGTAATAAAAGAACTTTGACTAATATCACTCAAGGATGTCCACAGAATCTTCATTTCCTAGTACATCAACCAAAACAAGAACAGCGCCTTCATAGTCATGAGGATAGAAAAGGAGCTCAACACCTGATTGGCGCTGAAGTCCGGGGAAAAGTTGATGGAGCCTTTGACTCGGGTTTTCTCATGACTGCTGCCGTGAATGGAACGATTTTTAGGGGGGTCTTATTTGCTCCTCAAAGAGCAGCAGCTGTCTCAAGGGGAGCCAATGTTGAACCAAAATGTTACCTAACGAGTTCATTTCCATCTACTAGACCATTTACAAACTCAAACCATGTGGACAATTTAAGGGCTTCCTCGCAACAGGTAGCTACTTGTTTGCGTGCAGGTTCCTGCCATGGTTCCCCGCAAGCTCCGGTGGTTTCACCATTTCCAACCATGCGAGGCACTCGGTCAATATCCAAAGAGCATAAAACTAGGACTGACCTTGAAGGGTTGGTTTTGACACTTGGAGGACCTGCTAGCGGAAATCCTGAGGTAAACTATTGA 1920 0.4411 MGSVVAEVAKKRAMWLYPKVLGFNPSERWGHSACFSKGFMYVFGGCCGGLHFSDVLTLDLEKMVWSKLATTGEKPGPRDSHSAVIVGNIMIVFGGTNGFKKVNHIHMLDLVTKEWVHPECQGTPPSPRESHTATLIGNERLVIFGGSGEGDANYLNDLHILDLRTMRWTCPVLKGDLPVPRDSHSTLAVGNSKLIVYGGDSGDQYHGNVNMLDMETMTWSKLKIQGSSPGVRAGHAAVNIGTKVYIIGGVGDKRYYNDIWIFDIYTCSWTQLDVPGKQPQGRFSHTAVVVDMDIAVYGGCGEDERPLNELLVLQHGAEHPNGRYNTSMCKVFGTYWNQEKKNITGGADTNSEATLKGGNVEVLGKEVFEVVSEKALPYHFDSGTSQQKRRRIAAMKVWDVDSEQEEHSLSLSQHSSPSQSDQEQTLGQKTNASVMDSQQCLVFKQINQIPSNCQHDNGSSNKRTLTNITQGCPQNLHFLVHQPKQEQRLHSHEDRKGAQHLIGAEVRGKVDGAFDSGFLMTAAVNGTIFRGVLFAPQRAAAVSRGANVEPKCYLTSSFPSTRPFTNSNHVDNLRASSQQVATCLRAGSCHGSPQAPVVSPFPTMRGTRSISKEHKTRTDLEGLVLTLGGPASGNPEVNY* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g3299 639 SMART kelc_smart 140 191 IPR006652 GO:0005515
Dod01g3299 639 SMART kelc_smart 243 292 IPR006652 GO:0005515
Dod01g3299 639 SMART kelc_smart 193 242 IPR006652 GO:0005515
Dod01g3299 639 Pfam Galactose oxidase, central domain 39 84 - -
Dod01g3299 639 MobiDBLite consensus disorder prediction 404 431 - -
Dod01g3299 639 PANTHER KELCH REPEAT DOMAIN 1 633 - -
Dod01g3299 639 MobiDBLite consensus disorder prediction 594 615 - -
Dod01g3299 639 Gene3D - 119 363 IPR015915 GO:0005515
Dod01g3299 639 MobiDBLite consensus disorder prediction 409 431 - -
Dod01g3299 639 Pfam Galactose oxidase, central domain 127 178 - -
Dod01g3299 639 Pfam Galactose oxidase, central domain 232 272 - -
Dod01g3299 639 PANTHER OS01G0300900 PROTEIN 1 633 - -
Dod01g3299 639 SUPERFAMILY Kelch motif 20 270 IPR015915 GO:0005515
Dod01g3299 639 Gene3D - 14 118 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g3299 Dod-Chr1 74059795 74064204 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g3299 15 328 Acyl Lipid Metabolism Gene Families AT3G05420 30.769 2.80e-37 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g3299 K20285 - gmx:100801275 949.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3299 01 74059795 74064204 Dod01g3299 01 74059795 74064204 ECH
Dod01g3299 01 74059795 74064204 Dod06g1850 06 26608552 26611758 PCT