Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1778 ATGTCCCACACCCAACAGACCCTAATGCCCCCTCATTCCCCGGAACCCGAAGACGAGCCCCCCACCCCGACCCAACAACAACAACATCCCGCCGCCGCCCCCGCCGCCGCCCTCCTCCACCTGTCCTTCAACCAAGACTCAGGCTGCTTCGCCGCCGGCACCGACCGCGGCTTCCGCATCTTCAACTGCGACCCCTTCCGCGAGATCTTCCGCCGCGACTTCGGCCCCGGTGGCGGCACCGCCCTCATCCACATGCTCTTCCGCTGCAACATCCTCGCCTTCGTCGGCGGCGGAGGACCCGACCCACGCTACCCGCCCAACAAGGTCATGATCTGGGACGACCACCAGTCCCGCTGCATCGGCGAGCTCTCCTTCCGCTCCGAGGTGAAGGGGGTTCGACTCCGCAGGGACCGAATCGTCGTTGTTCTCGCGCACAAGATCTTCGTGTACAATTTCGCGGACCTCAAGGTTTTGCACCAGATTGAGACGATCGCGAACCCTAAGGGGCTTTGCGAGGTTTCGCCTGTGTCTGGGACGATGGTGCTGGCGTGCCCTGGGCTGCAGAAGGGGCAGGTTAGGGTCGAGCATTACGCGTCGAAGAGGACCAAGTTTATAATGGCGCATGATTCGAGGATCTCGTGCTTCGCGCTCACGCAGGATGGGAGGTTGCTCGCTACTGCGAGCAGTAAGGGGACGCTTGTGAGGGTCTACAATACGTTGGATGGGTCGTTGCTTCAAGAGGTCCGGAGAGGTGCAGACAGAGCCGAAATATACAGCCTTGCCTTCTCTGCTACTGCACAGTGGCTAGCTGTCTCGAGTGACAAGGGAACCGTTCATGTCTTCAATCTGAAGGTTGATTCTGGACTGTCGGGGCTTGACAGATCTCATAGTACATCTGAGTCTAATCCTACTTCCCCCACGGCAGTTTCGTCTCTTTCATTCATTAAAGGTGTGTTACCCAAGTACTTTAGTTCAGAGTGGTCTGTAGCTCAGTTTCGATTGCAGGAAGGTTTGCAATATATTGTTGCCTTTGGCCATCAAAAGAATACAATTGTTATACTTGGCATGGATGGCAGCTTCTATCGATGCCAGTTTGATTCTGCAACTGGAGGAGAGATGACCCAACTTGAATATTACAATTTCCTAAAGCCAGAAGAGACATTCTAG 1167 0.5587 MSHTQQTLMPPHSPEPEDEPPTPTQQQQHPAAAPAAALLHLSFNQDSGCFAAGTDRGFRIFNCDPFREIFRRDFGPGGGTALIHMLFRCNILAFVGGGGPDPRYPPNKVMIWDDHQSRCIGELSFRSEVKGVRLRRDRIVVVLAHKIFVYNFADLKVLHQIETIANPKGLCEVSPVSGTMVLACPGLQKGQVRVEHYASKRTKFIMAHDSRISCFALTQDGRLLATASSKGTLVRVYNTLDGSLLQEVRRGADRAEIYSLAFSATAQWLAVSSDKGTVHVFNLKVDSGLSGLDRSHSTSESNPTSPTAVSSLSFIKGVLPKYFSSEWSVAQFRLQEGLQYIVAFGHQKNTIVILGMDGSFYRCQFDSATGGEMTQLEYYNFLKPEETF* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1778 388 Pfam WD domain, G-beta repeat 251 282 IPR001680 GO:0005515
Dod06g1778 388 Gene3D - 41 369 IPR015943 GO:0005515
Dod06g1778 388 SMART WD40_4 198 238 IPR001680 GO:0005515
Dod06g1778 388 SMART WD40_4 241 282 IPR001680 GO:0005515
Dod06g1778 388 SMART WD40_4 24 62 IPR001680 GO:0005515
Dod06g1778 388 MobiDBLite consensus disorder prediction 1 32 - -
Dod06g1778 388 SUPERFAMILY WD40 repeat-like 24 286 IPR036322 GO:0005515
Dod06g1778 388 PANTHER WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED 19 388 - -
Dod06g1778 388 PANTHER AUTOPHAGY-RELATED PROTEIN 18A-LIKE ISOFORM X1 19 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1778 Dod-Chr6 24560527 24564114 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1778 K22991 - gmx:100787427 649.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g1778 06 24560527 24564114 Dod06g1778 06 24560527 24564114 ECH
Dod01g2404 01 62774676 62778418 Dod06g1778 06 24560527 24564114 PCT