Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2404 ATGTCAGTTGCACCAGTTGAGAGTATCCCCTCATTAAGTAGTGATATCTTCTATGACATATTGCGGAGGCTTGATGGCGTAACATTGGCTAGTGCGGCATGTACTTGTTCTGCTTTTTGTTCCATCTCAAAAGAAGAGATTTTATGGGAAAATGTATGTTCGTCTATGTGGCCTTCAACCAGCAGGGAGGATGTCAAAAGCTTAATCTCTTCTATTGGTGGATTCAGAAAATTCTATGCAGATTGTTTCCCGCTTATTGTAAACAAGGACGTTGCAGCGTATCGACACAAAAACTACTGCGAGTACCCTGACAATTGGACTGAAGCTGAATATTACGGGGACATGATTGAATCTGAAAGCATCTGTCCATCAGACTTTGTTTCTATTGTAGATATTAGGTTCAAGGAGAAACCGATCTGTTCCAGAGTTCTGTGGGGAATTCCAAATGCAAATGGCTGTGGTGATTGGTTCTATAACTGCCCTTTCCGGATCGATATTCTCACTAATGCAGATAGAGATGATAACAATGATGGAGTGGTGAACTTTTCTGTATCAGATGGTCTGCCACCAATTACATCCATGGAAAGGGAAAGGAAAGATGGGAAGCTGTGGCAGGAGCTTCATGATGGGCTGCAGCTTAGTTGGATTGTAGTAAATCAGAAAATCAAGCAAGCTGCGAATCTCAGTAGCTGGAGCCCTCTTGGAGGTTTAAGACATTGGCCAACAGATAAGGATTTCGTGATTCGGTTCGGATCGGTTCTTCCTGCAAAGGACATTAATCTCCCTTGTCAAGTGGTGGAAAGCATCTGTATCATGAAATTTAGAGTGGTTCACACCGAAGAGGAGGGGGTTCAAACGACCCTTAAGTTAACAGAACTTAGCATGCAGTTGGAAGACATGGAAGGTGCTCATGTTAATGGAAGGAAGAGTTTGCATATCCTGAAGGAAGCACTTAGCTGCAAAAGGAGCAAAAATTATAGTGAAGCACTTGAGTGTTGTCATATGTATTCAAAAGTGCAGAATGAGTTGAAAGAGGAGAAGATGAGACACGAAAATAGGTTGGATAGGCTTTGTATTTTGACCGGCATTGCTGCTTTTTTGACATTCTGGTACTGCGTTTTATGA 1125 0.4213 MSVAPVESIPSLSSDIFYDILRRLDGVTLASAACTCSAFCSISKEEILWENVCSSMWPSTSREDVKSLISSIGGFRKFYADCFPLIVNKDVAAYRHKNYCEYPDNWTEAEYYGDMIESESICPSDFVSIVDIRFKEKPICSRVLWGIPNANGCGDWFYNCPFRIDILTNADRDDNNDGVVNFSVSDGLPPITSMERERKDGKLWQELHDGLQLSWIVVNQKIKQAANLSSWSPLGGLRHWPTDKDFVIRFGSVLPAKDINLPCQVVESICIMKFRVVHTEEEGVQTTLKLTELSMQLEDMEGAHVNGRKSLHILKEALSCKRSKNYSEALECCHMYSKVQNELKEEKMRHENRLDRLCILTGIAAFLTFWYCVL* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2404 374 PANTHER F-BOX PROTEIN-RELATED 4 370 - -
Dod01g2404 374 Coils Coil 340 360 - -
Dod01g2404 374 Gene3D - 3 107 - -
Dod01g2404 374 PANTHER F-BOX PROTEIN-RELATED 4 370 IPR045283 -
Dod01g2404 374 SUPERFAMILY F-box domain 6 103 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2404 Dod-Chr1 62774676 62778418 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2404 - - gmx:100500689 659.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2404 01 62774676 62778418 Dod01g2404 01 62774676 62778418 ECH
Dod01g2404 01 62774676 62778418 Dod06g1778 06 24560527 24564114 PCT