Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1193 ATGGCAAAGGGCGAGAAGAAGCCCGCGGAGAAGAAGCCCGCAGCCGCCGAGAAGGCTCCGGCGGAGAAGACGAAGGCGGAGAAGAAGATTCCGAAGGACGCTTCTTCCGGCGACAAGAAGAAGAAGAGGAAGGCGAAGAGCGTGGAGACTTACAAGATCTACATCTTCAAGGTCCTGAAGCAGGTCCACCCTGACATTGGGATCTCGAGCAAGGCCATGGGGATCATGAACAGCTTCATCAACGACATCTTCGAGAAGCTCGCTCAGGAATCTTCTAGACTCGCCCGATACAACAAGAAGCCCACCATCACCTCCAGGGAGATCCAGACTGCCGTGAGGCTCGTGCTTCCTGGTGAGCTCGCAAAGCATGCTGTATCTGAAGGAACCAAGGCCGTTACGAAGTTCACCAGCTCTTAA 417 0.5492 MAKGEKKPAEKKPAAAEKAPAEKTKAEKKIPKDASSGDKKKKRKAKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1193 138 MobiDBLite consensus disorder prediction 1 46 - -
Dod06g1193 138 PANTHER HISTONE H2B 4 138 - -
Dod06g1193 138 ProSitePatterns Histone H2B signature. 106 128 IPR000558 GO:0000786|GO:0003677|GO:0030527
Dod06g1193 138 Pfam Core histone H2A/H2B/H3/H4 6 114 IPR007125 GO:0003677
Dod06g1193 138 SUPERFAMILY Histone-fold 26 138 IPR009072 GO:0046982
Dod06g1193 138 PANTHER HISTONE H2B 4 138 IPR000558 GO:0000786|GO:0003677|GO:0030527
Dod06g1193 138 Gene3D Histone, subunit A 5 138 IPR009072 GO:0046982
Dod06g1193 138 SMART h2b3 41 137 IPR000558 GO:0000786|GO:0003677|GO:0030527
Dod06g1193 138 PRINTS Histone H2B signature 70 90 IPR000558 GO:0000786|GO:0003677|GO:0030527
Dod06g1193 138 PRINTS Histone H2B signature 92 109 IPR000558 GO:0000786|GO:0003677|GO:0030527
Dod06g1193 138 PRINTS Histone H2B signature 122 135 IPR000558 GO:0000786|GO:0003677|GO:0030527
Dod06g1193 138 PRINTS Histone H2B signature 109 122 IPR000558 GO:0000786|GO:0003677|GO:0030527
Dod06g1193 138 PRINTS Histone H2B signature 51 69 IPR000558 GO:0000786|GO:0003677|GO:0030527
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1193 Dod-Chr6 16060005 16060724 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1193 K11252 - gmx:100305731 201.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2164 01 58536522 58540196 Dod06g1193 06 16060005 16060724 ECH
Dod06g1193 06 16060005 16060724 Dod06g1193 06 16060005 16060724 ECH