Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0901 ATGGATACCAAGGGGAGACTAGTTGCAGGTTCACATAACAGGAATGAGTTTGTTCTAATCAATGCCGATGAGACTTCAAGGGTGAACAATGTTACAGAATTGAGTGGACAGGTTTGCCAGATCTGTGGGGATGAGATAGAGGTTACTGTGGATGGGGAACCATTTGTCGCTTGCAATGAATGTGCATTCCCAGTATGCAGACCTTGCTATGAGTATGAAAGAAGAGAGGGGAACCAAGCTTGCCCTCAGTGCAAAACCAGATACAAGCGCATTAAGGGTAGTCCTAGAGTTGAGGGTGATGAAGAAGAGGATGATATTGATGATTTGGAGAATGAGTTTGACATCGGAAGCAATATCAGGCGTGATCCTCATCACATTGCTGAGGCCATGCTTGCCGCTCGCCTTAACGTTGGACGTAGTTCAGAAGTGAATGCTCCAGGGGTCACCACACCATCAGAGTTTGATGCAGATTCTGTGGCTGCTGATATCCCTCTCCTGACATATGATCGTGAGGATGTTGGGATTTCTGCTGATAACCATGCTCTCATTATTCCTCCATTCATGCATCGTGGGAAAAGGGTTCATCCTATGCCTTTTCCTGGTTCATCTGTACCTATTCAACCCAGACCTATGGATCCTAAAAAGAATTTAGCAGTCTATGGATATGGAAGTGTCACATGGAAGGAAAGGATGGAGGAATGGAAGAAAACACAGAATGAAAAGCTTGAGGTGGTTAACGATGAAGGGCTTGATGATGACGGGAAAACTGGCGACAAGCATGATGATCCTGATTTGCCAAAAATGGATGAAGGCAGGCAGCCACTCTGGAGGAAGTTGCCAATTAGTCCAAGCAAGATAAATCCATATCGAATTATTATAGTACTCCGCATTGCTGTTCTTGGCCTCTTTTTTCACTATCGAATTCTCCATCCAGTCAATGATGCATACGCATTATGGCTGACATCAGTAATATGTGAAATCTGGTTTGCTGTATCTTGGATTTTGGATCAGTTTCCAAAATGGTGCCCAATTGAGCGAGAAACGTACCTTGATCGTTTGTCGTTGAGGTATGAGAAAGAAGGAAAGCCATCTGAATTAGCTGATATAGATGTATTTGTTAGTACAGTGGATCCTATGAAAGAGCCTCCACTTATTACTGCAAACACTGTTCTGTCCATCCTTGCTGTAGATTATCCAGTGGACAAAGTTGCATGCTATGTCTCAGATGATGGTGCAGCTATGCTTACCTTTGAAGCCCTTTCAGAAACATCTGAGTTTGCAAGGAAGTGGGTTCCATTCTGCAAGAAGTTCAGCATTGAGCCACGGGCTCCTGAATGGTATTTTACTCAGAAAGTTGACTATCTAAAAGACAAAGTGGATGCAACATTTATCAGGGAGCGTCGTGCTATCAAGAGAGAGTATGAAGAATTCAAAGTGAGGATTAATGCATTGGTTGCAATGGCACAGAAGGTGCCTGAGGATGGGTGGACAATGCAGGATGGGACTCCATGGCCCGGAAACAATGTCAAAGATCATCCTGGAATGATTCAGGTTTTCCTTGGTCAAAATGGTGTTCGTGATATTGAAGGAAATGAGTTACCTCGTCTTGTGTATGTGTCTCGTGAGAAAAGGCCTGGATTTGAACACCACAAAAAAGCCGGTGCTATGAATGCCTTGATACGAGTTTCAGCAATCATATCAAATGCTCCTTACCTGCTAAATGTCGATTGTGATCACTACATAAACAATAGTAAGGCACTTCGGGAAGCCATGTGCTTCATGATGGATCCTACATCAGGGGAAAAAATCTGCTATGTACAATTTCCTCAAAGATTTGATGGGATTGATCGTCATGATAGATACTCAAATCGCAATGTTGTATTCTTTGATATCAACATGAAAGGTTTAGATGGCATCCAAGGACCGATATATGTGGGAACTGGATGTGTCTTCAGGAGGCAGGCACTCTATGGATATGATGCTCCTGTGAAGAAGAAACCACCTGGGAAGACTTGTAACTGTTGGCCCAAATGGTGCTGCCTGTGTTGTGGATCTCGGAAGAAGAATAGGAAAGTGAAGTCAAGCGCCAAAAAGAAGATAAAGAGTAAGGATGCTACAAAGCAAATACATGCACTAGAAAATATTGAAGAGGGAATTGAAGGTATTGACAGTGAGAAGTCATCGCTAATGTCGCAACTAAAATTTGAGAAAAAATTTGGCCAGTCACCTGTTTTCATAGCTTCAACACTTATGGAAAATGGGGGCATTCCAAAAGGAGCAAGTTCAGCATCACTCCTGCAAGAAGCCATCCATGTCATTAGTTGTGGTTATGAAGATAAGACCGAGTGGGGAAAAGAGGTTGGCTGGATATATGGTTCTGTTACAGAGGATATTCTAACAGGTTTCAAGATGCATTGTCATGGTTGGAGATCTGTGTACTGTATGCCGAAAAGGCCTGCTTTTAAGGGCTCAGCTCCTATAAATCTCTCGGATCGTCTGCATCAGGTTCTTCGCTGGGCTCTTGGATCTGTTGAGATCCTGTTAAGCAGGCATTGTCCTTTATGGTATGGATATGGTTGTGGTTTGAAATCACTGGAGCGCTTTTCTTACATTAACTCAGTCGTTTATCCTTTGACTTCAATTCCCTTAATTGCCTACTGCACCTTGCCGGCAGTCTGTCTTCTCACTGGGAAGTTCATAGTCCCCGAGATTAGCAACTATGCCAGTGTCATTTTCATTGCCCTCTTCATCTCTATAGCTGCAACTAGCATCCTGGAAATGCAATGGGGAGGTGTTGGCATACATGACTGGTGGAGGAATGAACAGTTCTGGGTCATTGGCGGTGCCTCCTCCCATCTGTATGCTCTCTTTCAGGGTTTGCTTAAGGTTCTGGCAGGAGTGAACACAAACTTCACTGTCACATCCAAAGCTGCTGATGATGGAGAATTTGCTGAACTCTACATCTTCAAGTGGACATCATTGTTGATCCCTCCATTGACCTTGCTTATCATGAACATAATTGGAGTTATCGTAGGCGTTTCGGATGCAATAAACAATGGATATGATTCATGGGGTCCTCTTTTTGGTAAGCTATTTTTCGCCCTCTGGGTCATTCTCCATCTCTACCCATTCCTCAAAGGAGTCATGGGAAAACAGGAAGGTGTTCCTACCATCATCTTGGTTTGGGCTATTCTTCTTGCTTCAATCTTCTCACTTCTTTGGGTAAGGATCAACCCATTTTTGTCAAAAGATGACATCGTGTTGGAAATTTGTGGGTTGAATTGTGACTAG 3291 0.4336 MDTKGRLVAGSHNRNEFVLINADETSRVNNVTELSGQVCQICGDEIEVTVDGEPFVACNECAFPVCRPCYEYERREGNQACPQCKTRYKRIKGSPRVEGDEEEDDIDDLENEFDIGSNIRRDPHHIAEAMLAARLNVGRSSEVNAPGVTTPSEFDADSVAADIPLLTYDREDVGISADNHALIIPPFMHRGKRVHPMPFPGSSVPIQPRPMDPKKNLAVYGYGSVTWKERMEEWKKTQNEKLEVVNDEGLDDDGKTGDKHDDPDLPKMDEGRQPLWRKLPISPSKINPYRIIIVLRIAVLGLFFHYRILHPVNDAYALWLTSVICEIWFAVSWILDQFPKWCPIERETYLDRLSLRYEKEGKPSELADIDVFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFSIEPRAPEWYFTQKVDYLKDKVDATFIRERRAIKREYEEFKVRINALVAMAQKVPEDGWTMQDGTPWPGNNVKDHPGMIQVFLGQNGVRDIEGNELPRLVYVSREKRPGFEHHKKAGAMNALIRVSAIISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGEKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPGKTCNCWPKWCCLCCGSRKKNRKVKSSAKKKIKSKDATKQIHALENIEEGIEGIDSEKSSLMSQLKFEKKFGQSPVFIASTLMENGGIPKGASSASLLQEAIHVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMHCHGWRSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEILLSRHCPLWYGYGCGLKSLERFSYINSVVYPLTSIPLIAYCTLPAVCLLTGKFIVPEISNYASVIFIALFISIAATSILEMQWGGVGIHDWWRNEQFWVIGGASSHLYALFQGLLKVLAGVNTNFTVTSKAADDGEFAELYIFKWTSLLIPPLTLLIMNIIGVIVGVSDAINNGYDSWGPLFGKLFFALWVILHLYPFLKGVMGKQEGVPTIILVWAILLASIFSLLWVRINPFLSKDDIVLEICGLNCD* 1097
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0901 1096 Pfam Cellulose synthase 369 1085 IPR005150 GO:0016020|GO:0016760|GO:0030244
Dod06g0901 1096 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 1 1095 - -
Dod06g0901 1096 MobiDBLite consensus disorder prediction 243 271 - -
Dod06g0901 1096 ProSiteProfiles Zinc finger RING-type profile. 39 85 IPR001841 -
Dod06g0901 1096 CDD mRING-HC-C4C4_CesA_plant 37 87 - -
Dod06g0901 1096 SUPERFAMILY RING/U-box 25 107 - -
Dod06g0901 1096 Pfam Zinc-binding RING-finger 31 105 IPR027934 -
Dod06g0901 1096 SUPERFAMILY Nucleotide-diphospho-sugar transferases 382 900 IPR029044 -
Dod06g0901 1096 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 511 663 IPR029044 -
Dod06g0901 1096 PANTHER CELLULOSE SYNTHASE 1 1095 - -
Dod06g0901 1096 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 21 112 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0901 Dod-Chr6 11475354 11481459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0901 1 1095 Glycosyltransferase AT2G21770 78.091 0.0 1770
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0901 K10999 - gmx:100795809 1964.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0901 06 11475354 11481459 Dod06g0901 06 11475354 11481459 ECH
Dod02g2898 02 61196513 61203642 Dod06g0901 06 11475354 11481459 PCT