Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2898 ATGGATACTAAGGGGAGACTCATTGCAGGGTCACATAACAGGAATGAGTTTGTGCTTATCAATGCTGATGAGACTGCAAGAGTGAATGCTGTTACAGAATTAAGTGGGCAGATTTGCCAGATCTGTGGGGATGAGGTGGAGGTCACTGTTGGGGGGGAGCCATTTGTTGCTTGCAATGAGTGTGCATTCCCTGTGTGCAGATCTTGCTATGAGTATGAAAGAAGAGAGGGAAACCAAGTTTGCCCTCAGTGCAAGACCAGATACAAGCGCATCAAAGGTTGTGCAAGAGTTGAGGGTGATGAAGAAGAGGATGATATTGATGATTTGGAGAATGAGTTTGATATTGGGAGCAATCCTCATCAAATTGCTGAGGCCATGCTCTCTTCTCGCCTTAACATTGGCCGTGGCTCCCAGCTGCATGGTTCAAGGATCAACACACCATCAGAGTTTGATGCAGCTTCTGTGGCTTCTGAATTCCCTCTTCTTACATATGGTCAAGAGGATGTGGGAATTTCTGCTGATAAACATGCTCTCATTATTCCTCCGTTCATGCCTCGTGGGAAACGGGTTCATCCTATGCCTTTTCCTGATTCATCTGAGCCCGTTCAACCAAGACCTATGGATCCTAAAAAAGATTTAGCAGTTTATGGATATGGAAGTGTTACATGGAAGGAAAGGATGGAGGACTGGAAGAAAAAGCAGAGTGAAAAACTTCAGGTGGTTAAGCATGAAGGGGATAAGGATTTTGACGAGATAGATGATCCTGACTTACCAAAAATGGATGAAGGCAGGCAGCCACTTTGGAGAAAGTTGCCAATCAGTTCAAGCAGGATAAGCCCATACAGAATAATAATAGTGCTCAGGATTGCCATTCTTTGCCTCTTTTTCCAATATAGAATCCTCCATCCAGTCAATGATGCATATGCATTGTGGCTGACATCAGTAATATGTGAAATCTGGTTTGCAGTATCATGGATTTTGGATCAGTTTCCAAAATGGTGTCCAATAGAAAGAGAAACATATCTTGATCGGTTATCACTAAGGTATGAGAAAGAAGGAAAGCCATCTGAATTGGCTGATATAGATGTGTTTGTTAGCACAGTTGATCCTATGAAGGAACCTCCACTCATCACTGCAAACACGGTTCTTTCAATCCTTGCTGTGGACTATCCAGTGGAGAAAGTTGCATGCTATGTGTCAGATGATGGTGCTGCTATGCTTACATTTGAAGCGCTTTCGGAGACATCTGAGTTTGCAAGGAAGTGGGTTCCATTCTGCAAGAAGTTCAGCATTGAACCGCGGGCTCCTGAATGGTATTTTGCTCAGAAGGTTGACTATCTGAAAGATAAAGTGAATGCGGCATTTATCAGAGAACGCCGTGCAATTAAGAGGGAGTACGAAGAGTTCAAAGTGCGGATTAATGCATTAGTTGCGACAGCACAGAAGGTTCCTGAGGATGGGTGGACAATGCAGGATGGGACACCATGGCCTGGGAACAATGTGAGAGATCATCCTGGAATGATACAAGTTTTCCTTGGTCAAAATGGTGTTCGTGATATTGAAGGAAATGAATTACCTCGTCTTGTCTACGTGTCCCGTGAGAAAAGGCCTGGATATGAGCACCACAAGAAAGCTGGAGCTATGAATGCCTTGGTGCGAGTCTCGGCAATCATCTCTAATGCTCCTTACCTGCTGAATGTTGATTGTGATCACTACATAAACAACAGTAAGGCCCTTCGTGAAGCCATGTGCTTCATGATGGATCCTACATCAGGGAAGAAAATATGCTATGTACAATTTCCTCAAAGATTTGATGGGATTGATCGTCATGATAGATACTCGAATCGCAATGTTGTATTCTTTGATATCAATATGAAAGGTCTAGATGGCATCCAAGGACCAATATATGTGGGAACTGGATGTGTCTTCAGGAGGCAGGCACTTTATGGATACGATGCCCCCACTTCAAAGAAACCACCAGGGAAGACTTGTAACTGTTGGCCTAAATGGTGCTGCTGCCTGTGCTGCAGATCTCGGAAGAAGAAGAACAAAGGGAAGTCAAGTATGAAAAAGAAGATAAAGCATAAGGATGATACAAAGCAAATACCTACACTAGAAAACATAGAAGAAGGAATTGAAGGATTCGATAGCGAGAAGTCATCGCTAATGTCTCAACTAAAATTTGAGAAAAAGTTTGGGCAATCTGCTGTTTTCATAGCTTCAACACTTATGGAAGATGGGGGCCTTCCAAAGGCAGCAAGTTCTGCTACACTCTTGAAAGAAGCTATCCATGTAATCAGTTGTGGCTATGAGGATAAGACAGAGTGGGGGAAAGAGGTTGGGTGGATATATGGCTCAGTTACAGAGGATATTTTAACAGGTTTCAAGATGCACTGTCATGGTTGGAGATCAGTGTACTGCATGCCAAAAAGGCCTGCTTTTAAGGGTTCAGCTCCTATAAATCTCTCGGATCGTCTTCATCAAGTTCTCCGGTGGGCGCTTGGATCTGTTGAGATTCTTTTGAGTAGGCATTGTCCTATATGGTATGGTTATGGTTGTGGCTTGAAATGGCTGGAGCGGTTTTCGTATATAAACTCAGTTGTTTATCCTCTCACTTCGATCCCCTTAATCGCCTACTGCGCTTTGCCTGCTGTCTGCCTTCTCACTGGAAAGTTCATAGTGCCTGAGATTAGCAACTATGCCAGCCTCATTTTCATGGCCCTTTTCATATCTATAGCTGCAACTAGCGTCCTAGAAATGCAATGGGGAGGTGTTGGGATACATGACTGGTGGAGGAATGAGCAGTTCTGGGTCATTGGTGGTGCCTCCTCGCACTTGTTTGCTCTCTTTCAAGGCTTGCTTAAAGTCCTTGCAGGAGTTAACACAAACTTCACTGTCACATCAAAAGCTGCAGATGATGGAGAGTATGCTGAGCTCTACATATTCAAGTGGACATCCTTGTTGATCCCTCCCTTGACCTTGCTGATCATAAACATAATTGGTGTCATTGTTGGTGTTTCTGATGCCATAAACAATGGATATGATTCATGGGGTCCTCTCTTTGGGAAGCTATTTTTTGCACTCTGGGTCATTGTCCATCTTTACCCCTTCCTCAAGGGAGTAATGGGAAAACAAGAAGGTGTTCCAACCATCATTTTGGTTTGGGCTATTCTACTGGCTTCAATCTTCTCACTTCTATGGGTGAGGATCAACCCATTTTTGTCCAAAGGTGACATTGTATTGGAAATTTGTGGATTGAATTGTGATGACTAA 3273 0.4354 MDTKGRLIAGSHNRNEFVLINADETARVNAVTELSGQICQICGDEVEVTVGGEPFVACNECAFPVCRSCYEYERREGNQVCPQCKTRYKRIKGCARVEGDEEEDDIDDLENEFDIGSNPHQIAEAMLSSRLNIGRGSQLHGSRINTPSEFDAASVASEFPLLTYGQEDVGISADKHALIIPPFMPRGKRVHPMPFPDSSEPVQPRPMDPKKDLAVYGYGSVTWKERMEDWKKKQSEKLQVVKHEGDKDFDEIDDPDLPKMDEGRQPLWRKLPISSSRISPYRIIIVLRIAILCLFFQYRILHPVNDAYALWLTSVICEIWFAVSWILDQFPKWCPIERETYLDRLSLRYEKEGKPSELADIDVFVSTVDPMKEPPLITANTVLSILAVDYPVEKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFSIEPRAPEWYFAQKVDYLKDKVNAAFIRERRAIKREYEEFKVRINALVATAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVRDIEGNELPRLVYVSREKRPGYEHHKKAGAMNALVRVSAIISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPTSKKPPGKTCNCWPKWCCCLCCRSRKKKNKGKSSMKKKIKHKDDTKQIPTLENIEEGIEGFDSEKSSLMSQLKFEKKFGQSAVFIASTLMEDGGLPKAASSATLLKEAIHVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMHCHGWRSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEILLSRHCPIWYGYGCGLKWLERFSYINSVVYPLTSIPLIAYCALPAVCLLTGKFIVPEISNYASLIFMALFISIAATSVLEMQWGGVGIHDWWRNEQFWVIGGASSHLFALFQGLLKVLAGVNTNFTVTSKAADDGEYAELYIFKWTSLLIPPLTLLIINIIGVIVGVSDAINNGYDSWGPLFGKLFFALWVIVHLYPFLKGVMGKQEGVPTIILVWAILLASIFSLLWVRINPFLSKGDIVLEICGLNCDD* 1091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2898 1090 SUPERFAMILY RING/U-box 27 107 - -
Dod02g2898 1090 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 508 656 IPR029044 -
Dod02g2898 1090 ProSiteProfiles Zinc finger RING-type profile. 39 85 IPR001841 -
Dod02g2898 1090 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 1 1088 - -
Dod02g2898 1090 CDD mRING-HC-C4C4_CesA_plant 37 87 - -
Dod02g2898 1090 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 21 112 IPR013083 -
Dod02g2898 1090 SUPERFAMILY Nucleotide-diphospho-sugar transferases 374 904 IPR029044 -
Dod02g2898 1090 Coils Coil 92 112 - -
Dod02g2898 1090 Pfam Zinc-binding RING-finger 31 105 IPR027934 -
Dod02g2898 1090 Pfam Cellulose synthase 361 1078 IPR005150 GO:0016020|GO:0016760|GO:0030244
Dod02g2898 1090 PANTHER CELLULOSE SYNTHASE 1 1088 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2898 Dod-Chr2 61196513 61203642 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2898 1 1088 Glycosyltransferase AT5G64740 77.971 0.0 1756
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2898 K10999 - gmx:100798759 1966.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g2898 02 61196513 61203642 Dod06g0901 06 11475354 11481459 PCT