Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0862 ATGGCTCAGGTAGTGGCCACTCGATCGATTCACACATCCCTCTCGCGCCCCACCTCCGGATCTGCACCCCAAAGGCCTCAGACATTGCTAAAGCCTCCAACTTTTTCTTCCAAAGTGTTCCAATCTCAAAGGAACAACAGCAACAAGAAGCACCTCAGAGCTTCATCCAGAACCTGCCATGTCAATGCAAGGAAATCTGCACCTGCTGAAGTTGTACCAGTCTCACCCGAGGATGATCAAAAGATTGAGGAGGAGTTGCAGCACTTGCGTGGCTTGCAGCAGCTTGGTGAGACTTCTGTTGGGATGTGGTCAAAGCCCACGTTCAGGAGAAAGACTAAGATTGTTTGCACAATTGGTCCTTCTACCAATACAAAGGAGATGATTTGGAAGCTGGCTGAGGCTGGGATGAATGTTGCACGCTTGAATATGTCTCATGGAGACCATGCTTCTCATCAGAAAGTTATTGATTTGGTTAAGGAGTATAATGCACAATCCAAGGACAATGTGATTGCAATCATGCTTGACACCAAGGGTCCTGAGGTTAGGAGCGGGGATTTGCCACAACCAATCACATTAACACCTGGGCAAGAGTTCACTTTCACTATCCGGAGGGGTGTTGGAACTGCAGATTGTGTTAGCGTCAACTATGATGATTTCGTTAATGATGTGGAAGTGAGGGACATGCTTCTTGTTGATGGTGGTATGATGTCATTTATGGTTAAGTGTAAGACTGAGGATTCTGTGAAATGTGAAGTTGTTGATGGAGGAGAGCTAAAGTCAAGAAGACATTTGAATGTTCGAGGAAAAAGTGCAACACTGCCTTCGATCACTGTTTCTTTGCTGCAGAGAAGGGACTGGGATGACATCAAATTTGGAGTGGATAACCAAGTGGACTTCTATGCTGTTTCCTTCGTTAAGGATGCACAAGTAGTTCATGAGCTGAAGAATTATTTGAAGAGCTGTGGTGCTGATATACATGTCATTGTAAAGATTGAAAGTGCAGACTCTATACCAAACCTACATTCAATAATTACAGCGTCTGATGGGGCTATGGTTGCAAGAGGAGATCTTGGTGCAGAGCTTCCTATTGAAGAGGTTCCACTTTTGCAGGAAGAGATAATCAGGATATGCCGAAGCATGGGAAAGGCTGTTATTGTGGCAACAAATATGCTGGAAAGCATGATTGTTCACCCAACTCCAACCAGAGCAGAGGTATCTGATATTGCAATTGCTGTTCGAGAAGGTTCTGATGGAATAATGCTTTCTGGAGAAACTGCTCATGGAAAGTTCCCACTAAAAGCTGTGAAAGTAATGCACACAGTAGCATTACGGACGGAAGCCACTATTCCAGGTGGTCAGATGCCACCTAATATTGGTCAAGTATTCAAGAACCACATGAGCGAGATGTTTGCCTACCATGCAACCATGATGTCTGACACCCTTGGAACCTCAGCTGTTGTCTTCACTAGATCAGGCTTCATGGCTATCCTTCTGAGCCACTATCGACCAACTGGCACCATATTTGCTTTCACAGATCAGAAGAGAATACAACAGAGATTGGCTTTGTACCAAGGAGTCTGTCCCATTTACATGGAATTCTCTGATGATGCTGAAGAAACATTCAAAAGAGCCTTGGATTTGCTGCAGAAGCAAGGAATGGTGAAGGAAGGAGAAGAAGTTGCACTGGTACAAAGTGGCAGGCAACCGATATGGAGGTTCCAGTCCACTCACAACATCCAGGTCCGAACAGTGTGA 1755 0.4507 MAQVVATRSIHTSLSRPTSGSAPQRPQTLLKPPTFSSKVFQSQRNNSNKKHLRASSRTCHVNARKSAPAEVVPVSPEDDQKIEEELQHLRGLQQLGETSVGMWSKPTFRRKTKIVCTIGPSTNTKEMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPEVRSGDLPQPITLTPGQEFTFTIRRGVGTADCVSVNYDDFVNDVEVRDMLLVDGGMMSFMVKCKTEDSVKCEVVDGGELKSRRHLNVRGKSATLPSITVSLLQRRDWDDIKFGVDNQVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIRICRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGSDGIMLSGETAHGKFPLKAVKVMHTVALRTEATIPGGQMPPNIGQVFKNHMSEMFAYHATMMSDTLGTSAVVFTRSGFMAILLSHYRPTGTIFAFTDQKRIQQRLALYQGVCPIYMEFSDDAEETFKRALDLLQKQGMVKEGEEVALVQSGRQPIWRFQSTHNIQVRTV* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0862 584 PANTHER PLASTIDIAL PYRUVATE KINASE 2 42 584 - -
Dod06g0862 584 PANTHER PYRUVATE KINASE 42 584 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dod06g0862 584 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 100 449 IPR015813 GO:0003824
Dod06g0862 584 SUPERFAMILY PK beta-barrel domain-like 179 270 IPR011037 -
Dod06g0862 584 SUPERFAMILY PK C-terminal domain-like 433 584 IPR036918 -
Dod06g0862 584 ProSitePatterns Pyruvate kinase active site signature. 325 337 IPR018209 GO:0004743|GO:0006096
Dod06g0862 584 PRINTS Pyruvate kinase family signature 168 184 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dod06g0862 584 PRINTS Pyruvate kinase family signature 379 403 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dod06g0862 584 PRINTS Pyruvate kinase family signature 404 422 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dod06g0862 584 PRINTS Pyruvate kinase family signature 423 439 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dod06g0862 584 PRINTS Pyruvate kinase family signature 297 311 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dod06g0862 584 PRINTS Pyruvate kinase family signature 354 378 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dod06g0862 584 PRINTS Pyruvate kinase family signature 327 353 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dod06g0862 584 TIGRFAM pyruv_kin: pyruvate kinase 110 584 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dod06g0862 584 Pfam Pyruvate kinase, alpha/beta domain 472 564 IPR015795 -
Dod06g0862 584 Gene3D - 457 584 IPR036918 -
Dod06g0862 584 Gene3D - 180 273 IPR015806 GO:0004743|GO:0006096
Dod06g0862 584 Gene3D - 112 442 IPR040442 -
Dod06g0862 584 MobiDBLite consensus disorder prediction 1 32 - -
Dod06g0862 584 Pfam Pyruvate kinase, barrel domain 110 450 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0862 Dod-Chr6 10716841 10723032 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0862 K00873 - gmx:100809327 1047.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0862 06 10716841 10723032 Dod06g0862 06 10716841 10723032 ECH
Dod02g2956 02 62641673 62647105 Dod06g0862 06 10716841 10723032 PCT