Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2956 ATGGCTCAGAGTGTGGCAACAAGGTCCATTCAGAGCACCCTTTTGTGCCCCAGTTCTGGATCTGCAAATGAAACTGCACAGAAGCTGTTAAAGCCTCCAACTTTTGCTTCCAAGGTCTTCCCACTTGAAGGGAACAAGTGCCCCCAACTTGCCTTAAGAACCTTGAGGGTCAGTGCTAGGAAATCTGCACCTGCGGAAGTCATCCCAGTCTCACCCGAAGATGATCCAAAGATTGAGGAGCATTTGCAGCATTTGCACAGTGTGCAGCAAGTTGACGATGCTTCTGCTGGAATGTGGTCGAAGCCCACTGTTAGGCGCAAGACAAAGATAGTTTGTACCATTGGCCCTTCCACCAATACCAAGGAAATGATTTGGAAGCTGGCTGAGGCTGGCATGAATGTTGCTCGCCTCAACATGTCTCATGGAGATCATGCCTCTCATCAGAAAGTTATTGATTTGGTTAAAGAATATAATGCACAATCAAAGGACAACGTAATTGCTATCATGCTTGACACTAAGGGTCCTGAAGTTAGAAGTGGGGATCTGCCACAACCAATCACATTATCAAGTGGGCAGGAATTCACTTTTACTATCCAGAGAGGTGTTGGGACTGCAGAGTGTGTTAGTGTGAACTACGATGATTTTGTCAACGATGTGGAAGTTGGGGACATGCTTCTTGTTGATGGTGGTATGATGTCTTTGGTGGTTAAGTCCAAAACAGAAGATTCTGTTAAATGTGAAGTTGTTGATGGAGGAGAGCTCAAGTCAAGACGGCATTTGAATGTTAGAGGAAAAAGCGCAACACTGCCTTCCATCACTGAGAAGGATTGGGATGACATCAAATTTGGAGTGGACAATCAAGTTGACTTCTATGCTGTCTCCTTTGTTAAGGATGCTGAAGTGGTTCATGAACTGAAGAATTATTTGAAAAGTTGTGGAGCTAATATACATGTCATCGTAAAAATTGAAAGTGCAGACTCTATACCAAATTTGCATTCAATTATCACTGCATCTGATGGGGCTATGGTTGCCAGAGGAGATCTTGGTGCAGAGCTCCCTATTGAAGAGGTTCCACTTTTGCAGGAGGAGATTATCAACTTGTGCCGTAGCACGGGAAAGGCCGTTATTGTGGCGACAAATATGCTGGAAAGCATGATTGTTCACCCAACGCCTACCAGAGCGGAGGTATCAGATATAGCAATTGCTGTTCGTGAAGGTTCTGATGGAATAATGCTGTCTGGAGAAACTGCTCATGGAAAGTTCCCACTAAAAGCTGTGAAAGTAATGCACACAGTTGCATTACGTACAGAAGCCACTATACCAGGTGGTCAAATGCCACCTAATGTCGGTCAAGTTTTCAAGAACCACATGAGTGAGATGTTTGCATACCATGCAACAATGATGTCCAACACCCTTGGAACCTCAACGGTTGTCTTCACTAGAACAGGTTTCATGGCTATCCTACTAAGCCACTATCGACCTTCTGGCACCATATTTGCTTTTACAGATGATAAGAGGGTACAACAAAGGTTGGCATTGTATCAAGGAGTCTGTCCTATATACATGGAATTTTGTGATGATGCTGAAGCGACTTTCAGAAAAGCCTTGGATATGCTGCAGAAGCAAGGAATGGTGAAGGAAGGAGAAGAAGTAGCACTTGTACAAAGTGGCAGGCAACCCATATGGAGGTCTCAATCCACTCACAATATACAAGTCCGAAAGGTGTAA 1728 0.4427 MAQSVATRSIQSTLLCPSSGSANETAQKLLKPPTFASKVFPLEGNKCPQLALRTLRVSARKSAPAEVIPVSPEDDPKIEEHLQHLHSVQQVDDASAGMWSKPTVRRKTKIVCTIGPSTNTKEMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPEVRSGDLPQPITLSSGQEFTFTIQRGVGTAECVSVNYDDFVNDVEVGDMLLVDGGMMSLVVKSKTEDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNQVDFYAVSFVKDAEVVHELKNYLKSCGANIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIINLCRSTGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGSDGIMLSGETAHGKFPLKAVKVMHTVALRTEATIPGGQMPPNVGQVFKNHMSEMFAYHATMMSNTLGTSTVVFTRTGFMAILLSHYRPSGTIFAFTDDKRVQQRLALYQGVCPIYMEFCDDAEATFRKALDMLQKQGMVKEGEEVALVQSGRQPIWRSQSTHNIQVRKV* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2956 575 Gene3D - 176 269 IPR015806 GO:0004743|GO:0006096
Dod02g2956 575 TIGRFAM pyruv_kin: pyruvate kinase 106 575 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dod02g2956 575 ProSitePatterns Pyruvate kinase active site signature. 316 328 IPR018209 GO:0004743|GO:0006096
Dod02g2956 575 Gene3D - 108 433 IPR040442 -
Dod02g2956 575 SUPERFAMILY PK beta-barrel domain-like 175 266 IPR011037 -
Dod02g2956 575 Gene3D - 448 575 IPR036918 -
Dod02g2956 575 SUPERFAMILY PK C-terminal domain-like 424 575 IPR036918 -
Dod02g2956 575 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 98 440 IPR015813 GO:0003824
Dod02g2956 575 Pfam Pyruvate kinase, barrel domain 106 441 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dod02g2956 575 PANTHER PLASTIDIAL PYRUVATE KINASE 2 52 575 - -
Dod02g2956 575 PANTHER PYRUVATE KINASE 52 575 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dod02g2956 575 Pfam Pyruvate kinase, alpha/beta domain 463 556 IPR015795 -
Dod02g2956 575 PRINTS Pyruvate kinase family signature 370 394 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dod02g2956 575 PRINTS Pyruvate kinase family signature 288 302 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dod02g2956 575 PRINTS Pyruvate kinase family signature 395 413 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dod02g2956 575 PRINTS Pyruvate kinase family signature 345 369 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dod02g2956 575 PRINTS Pyruvate kinase family signature 414 430 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dod02g2956 575 PRINTS Pyruvate kinase family signature 164 180 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dod02g2956 575 PRINTS Pyruvate kinase family signature 318 344 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2956 Dod-Chr2 62641673 62647105 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2956 K00873 - gmx:100803036 1038.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g2956 02 62641673 62647105 Dod02g2956 02 62641673 62647105 ECH
Dod02g2956 02 62641673 62647105 Dod06g0862 06 10716841 10723032 PCT