Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0813 ATGTGGCCATTCAGCAGCAAAGGGGCTTCTGGGTTTTCATCATCTTCCACTGCCGAGGAAGTTACTCACGGCATCGATGCCACTGGCCTCACTGCTATTGTCACAGGAGCATCCAGTGGTATTGGCACTGAGACTACACGTGTTCTTGCTTTGCGTGGTGCCCATGTGGTTATGGGGGTGAGAAACTTGGTTGCTGCTAATGATGTTAAAGAAGCAATACTTAAGGAGATTCCCTCAGCCAAAGTTGATGCCATGGAGTTAGATCTCAGTTCAATGGAGTCTGTCAAGAAATTTGCTTCAGAATTTAAATCCTCTGGTCTTCCTTTGAACATTCTGATAAACAATGCAGGAATTATGGCATGCCCTTTCATGCTGTCCAAAGACAACATTGAGCTACAGTTTGCCACAAATCACTTAGGTCATTTTCTTTTGACAAATCTTTTGTTGGATACTATGAAGAAGACATCACGTGCAAGTAAGAAAGAAGGAAGAATTGTTAATGTCTCCTCAGAGGCTCACCGATTTACATATCCTGAAGGAATTCGTTTTGACAAAATTAATGATCAATCAAGTTATAGCAACTGGCGTGCATATGGGCAGTCGAAGCTAGCAAACATTTTACATGCTAATGAACTCACAAGATGTCTTAAGGAAGATGGAGTGGATATTACTGCAAATTCTCTTCATCCAGGAGCCATTTCCACCAATCTTTTCCGTTATAGCAGTGTACTGAACGGTATATTTAATGTGCTTGGGAGGCTTGTGCTTAAAAATGTCCAGCAGGGAGCAGCAACAACTTGCTATGTGGCATTGCACCCACAAGTGAAGGGAGTTAGTGGCAAATATTTTTCAGATAGCAACGAGGCCAAACCAACCTCACAGGGTACTGATGCTGATTTGGCTAAGAAACTATGGGACTTCAGCATGAATTTGATTAAGTAG 942 0.4236 MWPFSSKGASGFSSSSTAEEVTHGIDATGLTAIVTGASSGIGTETTRVLALRGAHVVMGVRNLVAANDVKEAILKEIPSAKVDAMELDLSSMESVKKFASEFKSSGLPLNILINNAGIMACPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTSRASKKEGRIVNVSSEAHRFTYPEGIRFDKINDQSSYSNWRAYGQSKLANILHANELTRCLKEDGVDITANSLHPGAISTNLFRYSSVLNGIFNVLGRLVLKNVQQGAATTCYVALHPQVKGVSGKYFSDSNEAKPTSQGTDADLAKKLWDFSMNLIK* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0813 313 PANTHER SHORT-CHAIN DEHYDROGENASE TIC 32 2 313 - -
Dod06g0813 313 PRINTS Glucose/ribitol dehydrogenase family signature 221 238 IPR002347 -
Dod06g0813 313 PRINTS Glucose/ribitol dehydrogenase family signature 31 48 IPR002347 -
Dod06g0813 313 PRINTS Glucose/ribitol dehydrogenase family signature 107 118 IPR002347 -
Dod06g0813 313 PRINTS Glucose/ribitol dehydrogenase family signature 157 173 IPR002347 -
Dod06g0813 313 Gene3D - 21 313 - -
Dod06g0813 313 PANTHER RETINOL DEHYDROGENASE 2 313 - -
Dod06g0813 313 Pfam short chain dehydrogenase 31 179 IPR002347 -
Dod06g0813 313 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 29 287 IPR036291 -
Dod06g0813 313 CDD retinol-DH_like_SDR_c_like 29 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0813 Dod-Chr6 10127382 10132985 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0813 31 291 Acyl Lipid Metabolism Gene Families AT3G55310 29.137 1.32e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0813 - - gmx:100784001 516.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3013 02 63753892 63757197 Dod06g0813 06 10127382 10132985 ECH
Dod06g0813 06 10127382 10132985 Dod06g0813 06 10127382 10132985 ECH