Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0752 ATGTGGGGGCGTCATTGGCTTGAGTCTTTGTTCGCACCCAGTTCTGATGCCACAATACCAACATTTCGTCATTCAAATTACTTGTCCTTGCCTCTCATGAGTGTGCTCAACATAGCCAGAGAGTATGGATTGCAATCATCTACAACCTCCTCTGATGAGATTGACTTCTGTGCCGTCTGCCTCGAGAGGCCATGTTCAGTGGCCGCTGAAGGATGTGGGCATGAGCTTTGTGTAAGATGTGCACTCTATCTATGCTCAACAAACAACGTTTCTTCTGAAATGGCTGGCCCTCCTGGCTCTATACCTTGCCCACTTTGTAGACACAGGAATTGTGTCTTTTGTTAA 345 0.4696 MWGRHWLESLFAPSSDATIPTFRHSNYLSLPLMSVLNIAREYGLQSSTTSSDEIDFCAVCLERPCSVAAEGCGHELCVRCALYLCSTNNVSSEMAGPPGSIPCPLCRHRNCVFC* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0752 114 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 34 112 IPR013083 -
Dod06g0752 114 ProSiteProfiles Zinc finger RING-type profile. 57 107 IPR001841 -
Dod06g0752 114 SMART ring_2 57 106 IPR001841 -
Dod06g0752 114 ProSitePatterns Zinc finger RING-type signature. 72 81 IPR017907 -
Dod06g0752 114 PANTHER HOMEOBOX PROTEIN WARIAI 1 111 - -
Dod06g0752 114 PANTHER E3 UBIQUITIN-PROTEIN LIGASE XBOS32 1 111 - -
Dod06g0752 114 SUPERFAMILY RING/U-box 56 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0752 Dod-Chr6 9187706 9188584 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0752 K19044 - gmx:100785638 222.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3072 02 64944361 64949573 Dod06g0752 06 9187706 9188584 PCT