Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0496 ATGAAGCTTCGGAGATCCTTGATGCAGGGTTTATTCCTAGGGTTTCTGGTGGTGTCGATGGTGGCGCCGCCATCAATGGGGAGATTCGTGGTGGAGAAGAACAGCTTGACGGTGACGTCGCCGGAGAAGATAAAGGGCACGCACGACAGCGCTATTGGCAACTTTGGGATACCCCAATACGGTGGTAGCATGGCTGGGAACGTTGTGTACCCGAAGGATAACCAGAAGGGTTGCAAGGAGTTCGATGAGTTCGGGATTTCCTTCAAATCCAAGCCCGGTGCTCTTCCCACCATCGTTCTGCTCGATCGTGGAAATTGCTTCTTTGCTTTGAAAGTCTGGAATGCCCAGAAGGCTGGAGCTTCTGCTGTTCTTGTTGCAGATGATATTGAGGAAAACTTAATAACTATGGACACACCTGAAGAGGGTGCATCATCTGCAAAATACATAGAGAGCATAACAATACCATCGGCTCTCATTGAAAAAAGTTTTGGTGAAAAATTAAAGAATGCCATAAGTGGTGGGGATATGGTCAATGTGAATCTTGATTGGAGAGAGGCTGTCCCTCACCCTGATGATCGTGTGGAGTATGAGTTGTGGACCAACAGTAATGATGAGTGTGGAGCTAAATGTGATATGTTGATGGACTTTGTGAAGGATTTTAAGGGTGCCGCACAGATACTAGAGAAAGGTGGTTACACTCAGTTTACACCCCATTATATAACTTGGTACTGTCCTCAGGCGTTCACATTAAGCAAACAATGCAAGTCCCAGTGCATAAATCATGGAAGATATTGCGCCCCAGATCCTGAACAGGACTTCAGCACTGGTTATGATGGGAAAGATGTGGTTATTGAAAATTTAAGGCAGTTGTGTGTTTTTAAGGTGGCAAATGAAACCAAAAAGCCTTGGGTGTGGTGGGACTATGTCACTGATTTTCAGATAAGATGCCCAATGAAGGAGAAAAAATACAATAAGGACTGTGCTGAGGCTGTCATTAAATCACTTGGTCTTGATCTTAAAAAGATTGACAGGTGCATGGGAGATCCAGATGCTGATTCTGAAAATCCTGTTTTGAAAGAAGAGCAAGACGCCCAAGTTGGGAAGGGATCGCGAGGTGATGTTACCATATTGCCTACCCTTGTTGTCAATAATCGGCAATATCGAGGAAAATTGGAGAAAGGGGCTGTCTTAAAAGCTATTTGTTCTGGGTTTGAAGAAACTACTGAACCAGCTGTCTGTTTGAGCAGTGATGTGGAGACAAATGAGTGCTTAGATAATAGTGGTGGCTGTTGGCAGGATAAAGCAGCTAATATCACTGCATGCAAGGATACATTCCGTGGGCGAGTATGTGAATGCCCCCTGGTGGATGGTGTGCAGTTCAAAGGAGATGGTTATACAACCTGTGCAGCCAGTGGACCTGGGCGGTGCAAGATAAACAATGGAGGTTGTTGGCATGAGGCCCGGCATGGACATGCATTTTCTGCTTGTTTGGATAATGGAGAGGTTAAATGCCAGTGTCCTGAAGGGTTTAGGGGTGATGGTGTCAAAAATTGTGATGACATTGACGAATGCAGAGAGAGGAAAGCTTGTCAGTGCCCTGAATGTAGCTGCAAGAATACCTGGGGCAGCTATGACTGCAGTTGTAGCGGAGATCTTCTGTACATCAGGGACCATGATGCCTGCATAAGCAAAACTGCTGCTAGCCAGGGAAAATCTGCTTGGGCTGCTTTTTGGGTCATTTTGATTGGCTTAGTTCTAGCTGCTGGTGGTGCATACCTTGTGTACAAATACAGAATAAGGTCATACATGGATTCTGAAATCAGAGCCATTATGGCACAGTACATGCCCTTGGACAGCCAAGGAGAAGTCGTACATCATGTCAACGATGAAAGAGCATGA 1899 0.456 MKLRRSLMQGLFLGFLVVSMVAPPSMGRFVVEKNSLTVTSPEKIKGTHDSAIGNFGIPQYGGSMAGNVVYPKDNQKGCKEFDEFGISFKSKPGALPTIVLLDRGNCFFALKVWNAQKAGASAVLVADDIEENLITMDTPEEGASSAKYIESITIPSALIEKSFGEKLKNAISGGDMVNVNLDWREAVPHPDDRVEYELWTNSNDECGAKCDMLMDFVKDFKGAAQILEKGGYTQFTPHYITWYCPQAFTLSKQCKSQCINHGRYCAPDPEQDFSTGYDGKDVVIENLRQLCVFKVANETKKPWVWWDYVTDFQIRCPMKEKKYNKDCAEAVIKSLGLDLKKIDRCMGDPDADSENPVLKEEQDAQVGKGSRGDVTILPTLVVNNRQYRGKLEKGAVLKAICSGFEETTEPAVCLSSDVETNECLDNSGGCWQDKAANITACKDTFRGRVCECPLVDGVQFKGDGYTTCAASGPGRCKINNGGCWHEARHGHAFSACLDNGEVKCQCPEGFRGDGVKNCDDIDECRERKACQCPECSCKNTWGSYDCSCSGDLLYIRDHDACISKTAASQGKSAWAAFWVILIGLVLAAGGAYLVYKYRIRSYMDSEIRAIMAQYMPLDSQGEVVHHVNDERA* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0496 632 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 17 611 - -
Dod06g0496 632 Pfam PA domain 65 167 IPR003137 -
Dod06g0496 632 CDD PA_VSR 54 181 - -
Dod06g0496 632 Gene3D - 26 190 - -
Dod06g0496 632 SUPERFAMILY PA domain 38 174 IPR046450 -
Dod06g0496 632 ProSitePatterns Calcium-binding EGF-like domain signature. 520 546 IPR018097 GO:0005509
Dod06g0496 632 PANTHER VACUOLAR-SORTING RECEPTOR-LIKE PROTEIN 17 611 - -
Dod06g0496 632 CDD EGF_CA 520 548 - -
Dod06g0496 632 Pfam Complement Clr-like EGF-like 503 523 IPR026823 -
Dod06g0496 632 Gene3D Laminin 413 468 - -
Dod06g0496 632 Gene3D Laminin 474 554 - -
Dod06g0496 632 ProSitePatterns EGF-like domain signature 2. 504 518 IPR000742 -
Dod06g0496 632 SMART egfca_6 520 562 IPR001881 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0496 Dod-Chr6 6036578 6042359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0496 27 632 Miscellaneous Gene Families AT2G14740 84.653 0.0 1099
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0496 - - gmx:100803958 1222.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0496 06 6036578 6042359 Dod06g0496 06 6036578 6042359 ECH
Dod02g1410 02 16933390 16937023 Dod06g0496 06 6036578 6042359 PCT