Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1410 ATGAAGCTTTGGAGATGGGCAGTGAGTTTGATTCTAGGGTTCCTGGTGCCGCTGTCGATGGCGAGATTCGTGGTGGAGAAGAACAGCTTGAGGGTGACCTCGCCGGAGAAGATCAGAGGCACGCACGACAGTGCTATCGGGAACTTCGGGATTCCTCAGTACGGAGGGAGCATGGCTGGGAACGTGGTTTACCCTAAGGATAACAAGAAAGGCTGCAAAGAGTTCAATGAGTTCGATATTTCATTCAAATCAAGGCCTGGTGCTCTTCCCACTGTCGTTTTACTCGATCGCGGAAATTGCTTCTTTGCCTTGAAGGTCTGGAATGCTCAGAAGGCTGGAGCTTCTGCGGTTCTTGTTGCAGATGATATTGACGAGCCTTTAATAACTATGGACACACCTGAGGAGGATGGATCATCTGCGAAATACATAGAGAACATAACAATACCATCTGCTCTTGTTGGAAAAGCTTTTGGCGAAAAATTGAAGGATGCCATAAGTGGCGGTGATATGGTCAACGTAAACCTTGATTGGAGAGAGGCTGTCCCGCACCCGGATGATCGTGTAGAGTATGAATTATGGACCAATAGCAATGATGAATGTGGAGTTAAATGTGATATGTTGATGGACTTTGTGAAGGATTTCAAGGGTGCAGCACAGATACTGGAGAAAGGTGGTTACACTCAGTTTACACCCCATTATATAACTTGGTACTGTCCACAGGCATTCACATTAAGCAAACAGTGTAAGTCCCAGTGCATAAATCAAGGAAGATATTGCGCTCCAGATCCTGAGCAGGACTTCAGCACAGGTTATGATGGGAAAGATGTGGTTATTGAAAATTTAAGGCAGCTATGTGTTTTCAAGGTGGCAAATGAAACTGGAAAGCCTTGGGTGTGGTGGGACTATGTCACTGATTTCCAAATTAGATGCCCAATGAAGGAGAAAAAGTACAATAAGGACTGTGCTGATGCTGTCATTAAATCACTAGGTCTTGATATGGACAAGATTGAAAAGTGCATGGGAGATCCAAATGCTGATTCTGACAATCCTGTTTTGAAAGAAGAACAAGATGCCCAGATTGGGAAGGGATCACGGGGTGATGTCACCATATTGCCTACTCTTGTTGTCAATAATCGACAATATCGAGGAAAATTGGAGAAAGTTGCTGTTTTAAAGGCTATTTGTGCTGGGTTTGAGGAAACTACTGAACCAGCTGTTTGTCTGAGCAACGATATGGAGACAAATGAGTGCCTGACATCCAATGGTGGTTGTTGGCAGGATAAAGCAGCTAACATCACTGCATGCAAGGATACGTTCCGCGGGCGAGTCTGTGAATGCCCCCTGGTTGATGGTGTGCAGTTCAAAGGAGATGGTTACACAACCTGTGAAGCTAGTGGACCTGGGCGTTGCAAGATAAATAATGGAGGCTGTTGGCATGATGCTAGGAATGGACATGCATTCTCTGCTTGTTCAGATAACGGAGGGGTTAAGTGCCAGTGTCCTCCAGGGTTTAGAGGTGATGGGGTCAAAAATTGTGAAGACATTGATGAATGCAAGGAGAAGAGAGCTTGTCAATGCCCCGAATGTAGCTGCAAGGATACTTGGGGCAGCTATGACTGCACCTGTAGTGGGGGTCTTCTGTATATCAAGGACCATGATACCTGCATAAGTAAAACCGCCAGTCAAGGAAAATCTGCTTGGGCTGCTTTTTGGGTCATTTTGATTGGCATAGTTATGGCTGCTGGTGGGGCATTCCTTGTGTACAAATACAGAATAAGGCAATACATGGATTCGGAAATAAGAGCTATCATGGCACAATATATGCCGTTGGACAGCCAAGGAGAAGTGCCAAATCATGTCAATGATCAAAGAGCATGA 1878 0.4531 MKLWRWAVSLILGFLVPLSMARFVVEKNSLRVTSPEKIRGTHDSAIGNFGIPQYGGSMAGNVVYPKDNKKGCKEFNEFDISFKSRPGALPTVVLLDRGNCFFALKVWNAQKAGASAVLVADDIDEPLITMDTPEEDGSSAKYIENITIPSALVGKAFGEKLKDAISGGDMVNVNLDWREAVPHPDDRVEYELWTNSNDECGVKCDMLMDFVKDFKGAAQILEKGGYTQFTPHYITWYCPQAFTLSKQCKSQCINQGRYCAPDPEQDFSTGYDGKDVVIENLRQLCVFKVANETGKPWVWWDYVTDFQIRCPMKEKKYNKDCADAVIKSLGLDMDKIEKCMGDPNADSDNPVLKEEQDAQIGKGSRGDVTILPTLVVNNRQYRGKLEKVAVLKAICAGFEETTEPAVCLSNDMETNECLTSNGGCWQDKAANITACKDTFRGRVCECPLVDGVQFKGDGYTTCEASGPGRCKINNGGCWHDARNGHAFSACSDNGGVKCQCPPGFRGDGVKNCEDIDECKEKRACQCPECSCKDTWGSYDCTCSGGLLYIKDHDTCISKTASQGKSAWAAFWVILIGIVMAAGGAFLVYKYRIRQYMDSEIRAIMAQYMPLDSQGEVPNHVNDQRA* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1410 625 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 14 604 - -
Dod02g1410 625 ProSitePatterns EGF-like domain signature 2. 498 512 IPR000742 -
Dod02g1410 625 CDD EGF_CA 514 545 - -
Dod02g1410 625 Pfam PA domain 59 161 IPR003137 -
Dod02g1410 625 ProSitePatterns Calcium-binding EGF-like domain signature. 514 540 IPR018097 GO:0005509
Dod02g1410 625 PANTHER VACUOLAR-SORTING RECEPTOR-LIKE PROTEIN 14 604 - -
Dod02g1410 625 Gene3D Laminin 468 517 - -
Dod02g1410 625 Gene3D Glutaredoxin 271 397 - -
Dod02g1410 625 SMART egfca_6 514 556 IPR001881 GO:0005509
Dod02g1410 625 Gene3D Laminin 407 463 - -
Dod02g1410 625 Gene3D - 20 184 - -
Dod02g1410 625 CDD PA_VSR 48 175 - -
Dod02g1410 625 Pfam Complement Clr-like EGF-like 497 517 IPR026823 -
Dod02g1410 625 Gene3D Laminin 518 556 - -
Dod02g1410 625 SUPERFAMILY PA domain 91 167 IPR046450 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1410 Dod-Chr2 16933390 16937023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1410 21 625 Miscellaneous Gene Families AT2G14740 84.793 0.0 1108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1410 - - gmx:100820115 1220.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1410 02 16933390 16937023 Dod06g0496 06 6036578 6042359 PCT