Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2693 ATGTTGGATGGCAAAAGAAGACAGCAGCAGGAGCAGGAGCAGTGTGTTCTTGTGTCAGCGTCACATTATACTTTGATAGCCATCTATCCTGGCCTGCTTGCTTTCTTTACTCCCAAACGGAGCGCATACAATACAATACCCCTGCTCTGTTACATTCCTGTCATTTTCCCCTTCCTTTTTTTTTTAAGGAAGCACCCTCTTCACACACTTCTCCTCTGTTTCTCAAGTTTCCAATTCTTTCTTAACCCCTCTCACTACCATTTCCCTCTTTCCCTAATGGATGCAGAGTCTGCTCAAGTTGCTTCCCAACCATTGAAGTATCAGACATGGTTCTTGAAAGTTTCCATCCACTGTGAAGGTTGCAGGAGGAAAGTAAAGAAAGTTCTGCGGAAAATTGATGGAGTTTTCACCGCAACAATTGATCCACAGCAGCATAAGGTAACAGTAACAGGAAGCGTTGGTATTGAGACCCTCATAAGGAAACTGGTCAAGGCCGGGAAACCCGCTGAAGTTTGGCCGGAGAATCTGGCCGCCGGCAAGGGAAAAACCTCCGGCGGCAAAGCGAAGAAGAGGAACGAACAAAGCGACCCAGAAAGCATCGAGAACCATTCTGCTCCAAATGCTGAATCCAACCTCTGCTCTGCCAAAAACAGGGGAATTGAAAATGCTGACAATTCAAGCAACGGCGTAAAAACCAAGAAGAGCAAGGACTCAAAAACCGGCGGAAACTCGCCGGAAAACTCTCCGGTGCTGGAACAGAACCACAGGGGTGGTGAAGGTGAAGGTGAGGGGGGTTCTGTGAAGAAGAAGAAAAAGAAAGGTCAGAGTCAGAGTGGTGGCAGAGGAAGCAATGGGTTGAGTTCAGGTTCAGAATCAACCAGTGCACCTGCACACACTGGATCCCAGTTCCAGAGTAGTACCGGGCAGGTTGCGGGCCAGATGAATCTCAGCCCTACACGTCAGCAATCATACCTGTATCCAGAAACTTACTACTATCCTCCTCTGATGTACCTTGCAACATATAATAACAGAATGTATCCCATGGGGAGAATGGGTGCAGGTGGTCCTTCTTACTATGTTTCACCATTGCCCTACATGTGTGCAGGCCTGGACCACGACCCTTATCAGTTTCAATCTGCACCGTTGGTTCCCTTTGAGATCTTCAGTGATGAAAATGCTAACGGATGTTTTATCATGTGA 1200 0.4742 MLDGKRRQQQEQEQCVLVSASHYTLIAIYPGLLAFFTPKRSAYNTIPLLCYIPVIFPFLFFLRKHPLHTLLLCFSSFQFFLNPSHYHFPLSLMDAESAQVASQPLKYQTWFLKVSIHCEGCRRKVKKVLRKIDGVFTATIDPQQHKVTVTGSVGIETLIRKLVKAGKPAEVWPENLAAGKGKTSGGKAKKRNEQSDPESIENHSAPNAESNLCSAKNRGIENADNSSNGVKTKKSKDSKTGGNSPENSPVLEQNHRGGEGEGEGGSVKKKKKKGQSQSGGRGSNGLSSGSESTSAPAHTGSQFQSSTGQVAGQMNLSPTRQQSYLYPETYYYPPLMYLATYNNRMYPMGRMGAGGPSYYVSPLPYMCAGLDHDPYQFQSAPLVPFEIFSDENANGCFIM* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2693 399 Pfam Heavy-metal-associated domain 114 167 IPR006121 GO:0046872
Dod05g2693 399 SUPERFAMILY HMA, heavy metal-associated domain 106 173 IPR036163 GO:0046872
Dod05g2693 399 Gene3D - 106 170 - -
Dod05g2693 399 ProSiteProfiles Heavy-metal-associated domain profile. 115 171 IPR006121 GO:0046872
Dod05g2693 399 PANTHER HEAVY-METAL-ASSOCIATED DOMAIN PROTEIN 96 399 - -
Dod05g2693 399 MobiDBLite consensus disorder prediction 256 270 - -
Dod05g2693 399 MobiDBLite consensus disorder prediction 174 312 - -
Dod05g2693 399 CDD HMA 112 170 IPR006121 GO:0046872
Dod05g2693 399 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 96 399 - -
Dod05g2693 399 MobiDBLite consensus disorder prediction 277 312 - -
Dod05g2693 399 MobiDBLite consensus disorder prediction 199 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2693 Dod-Chr5 53064714 53066723 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2693 - - lja:Lj0g3v0144089.1 331.257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2693 05 53064714 53066723 Dod03g1333 03 16956127 16957559 PCT