Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1333 ATGGATTCAAAACAAGCTGAAGCTGCTGCAGCACCTTTGAAGTATCAGACCTGGTTCTTGAAAGTTTCTATCCACTGTGAAGGTTGCAGGAGGAAAGTCAAGAAAGTTCTGCAAAGCATTGATGGTGTTTTCACTACAACAATAGACCAACAGCAGCAGAAAGTAACAGTAACTGGGAGTGTTGCTGTTGAGACCCTTCTCAGGAAACTCCTCAGAGCCGGCAAGAACGCCGAGATTTGGCCGGAGAATCTCGACGGCAACGGAAAATTCTCCAGCCAAGCGAAGAAGACTAAAGGAGGAACGAAAGACACAGAAAAAATGGAAAAAAACCATTCTTCTTCTGAGAAAAAGAGGAGTACTACTGAAAGTGCTGCAAGTAGTCACAACAAAAAAAGCAATAAGATCAGCAACTCAAAAACCGGCGAGAACTCGCCGGTAAAGTCTCCCGCCGGCGACCATGCTTTACCGGAGGATCTCAGCGGTGGCCAGAGGGACGGTGGCGGAGGAGGTTCTGGTAAGAAGAAGAAAAAGAAAAATGGGTTGGGTTCAGCTTCCGCCGGTGCACCTGCACACACCGGAATATTCCAGTTTCAGCATCAAGGGCAGGACGTGGGGCCGGAAATGGGAGAGGTGAATCTCAGCCCTACACGTCAGCAACCATACTTGTATACAGAAAGTGATTACCCTCCAATGGTGTATGTTTCAGCTTATTACAATAGGTTGTTGTATCCCATGGGAAGAATGGGTGGTCCTTGTTACTATGTTCCTACCCCTCCTCCTTCACCCTACACGTCTGCAGGCATAGACCAAGACAGTTATCAGTTTCAATCAAGGCCATTGGTTTCCTTTGAGATCTTCAGTGATGAAAATGCCAATGGATGTTCGATTATGTGA 894 0.4687 MDSKQAEAAAAPLKYQTWFLKVSIHCEGCRRKVKKVLQSIDGVFTTTIDQQQQKVTVTGSVAVETLLRKLLRAGKNAEIWPENLDGNGKFSSQAKKTKGGTKDTEKMEKNHSSSEKKRSTTESAASSHNKKSNKISNSKTGENSPVKSPAGDHALPEDLSGGQRDGGGGGSGKKKKKKNGLGSASAGAPAHTGIFQFQHQGQDVGPEMGEVNLSPTRQQPYLYTESDYPPMVYVSAYYNRLLYPMGRMGGPCYYVPTPPPSPYTSAGIDQDSYQFQSRPLVSFEIFSDENANGCSIM* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1333 297 MobiDBLite consensus disorder prediction 125 145 - -
Dod03g1333 297 CDD HMA 20 78 IPR006121 GO:0046872
Dod03g1333 297 Pfam Heavy-metal-associated domain 22 73 IPR006121 GO:0046872
Dod03g1333 297 MobiDBLite consensus disorder prediction 96 124 - -
Dod03g1333 297 PANTHER HEAVY-METAL-ASSOCIATED DOMAIN PROTEIN 5 297 - -
Dod03g1333 297 MobiDBLite consensus disorder prediction 80 188 - -
Dod03g1333 297 ProSiteProfiles Heavy-metal-associated domain profile. 23 79 IPR006121 GO:0046872
Dod03g1333 297 Gene3D - 14 79 - -
Dod03g1333 297 SUPERFAMILY HMA, heavy metal-associated domain 14 81 IPR036163 GO:0046872
Dod03g1333 297 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 5 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1333 Dod-Chr3 16956127 16957559 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1333 - - ccaj:109804519 263.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1333 03 16956127 16957559 Dod03g1333 03 16956127 16957559 ECH
Dod05g2693 05 53064714 53066723 Dod03g1333 03 16956127 16957559 PCT