Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2681 ATGGCTGTCACTACTAGCAACAGAAAACGCCCACAACACTGGCTGATCGCGAATCGCACCCATCGGTCTCCGAATTCTTCAGATTCTCACGGATCAAAAAGACCTAGATTCTCAGCCATGCCCAAGAGCTCCACCCCATCCCTATCTTCTTCCACTAGTGCGGGTTCAAGAATTTCCCGCTACCCCCATTCAATGCCACCCTTGCGTAGGGAAGTTCACGCCCCATGTAGACCACAAAAGTTTGTTTCTTTCGACGTTTCAAGAACAGAATTGAGCTTGAGGAATGCTCCGAAGGAGGACATTGACAATGGTAGGGTTAATGCATTACGCAAGTACCAGCAGGCGAGGAATGATGCATTAGCTTCCATTCGGTTCATCGAAGTGGACTCTGATAGTGATAGCCACAGTGAAGGCGTTTCGGAAGATTCAACTGTGCAAGAGGTTCATGTTGTAGAAGAAGATGGAGGAGAAGGGCCCTCTATGGTGACAGAACAGAGGAGGCAAGAGAGTGATGTGGTCGTGACGGAGATTATACATGATTTGGATGCCAAGGTTGTTGCAGAAGGTGGCCTTATGCAGCAGTCAACTCCATCTGCGGTTTCTGAGTTGAGTAACAGTAATTTGGATGTGTTTAATACTGGGAAGATGTTGGACAATTTGTCCCTAAGTCCGAAGCATGATCTTTCAAGTGTTCGTGACTACAAGAAATCGTTTGAGTCTGTTGGTAAACGAATGGATGCACTTCAGAGGCTGAACTTTGAAATTCAACTTAACGAGAAGCGAAGGGCCACCTTTGATTTGCTGCGCCCGAAGAAGGAGCTGGAAGTGCCATTGGAACCTTTTTTTCCTCTTACAAAGGAGGAAAAAGCTGAGATTATGCATGCCTTTTCGGCCAATCGGAACAAGATATTGGTTACCCATGAAAAATCTAACATTGAGATTTCAGTCGAGAATTTCTGGTGCCTTAGGCCGCGTGCATGGTTAAACGATGAGGTGATAAATTTGTACCTTGAGCTGCTGAAAGAGCGGGAGAATAGGGAGACACAGAAGTTTCTCAACTGTCACTTTTTCAATTCCTTCTTTTACAAAAGGTTAATAAGTGGCGAGAATGGTTATGATTTCAACTCTGTAAGGAGATGGACCAGCCAAAAGAAACTGGGATATGGCCTCCATGAATGTGATAAAATATTTGTACCTATCCATCAAGAGAACCATTGGTGCTTGGCTGTTATCAATCAGAGAGACAAGAAATTTCAGTATCTTGACTCACTGAAAGGAATGGATACACATGTGCTGAAAGTGCTGGCTAGGTATTTTGTAGATGAAGTAAAGGACAAGACTGGAAAAAATATCGATGTCAGTTCTTGGGAAAAAGAATTTGTAGAAGACCTTCCTGAACAGAAGAATGGGTATGATTGTGGTGTGTTTATGATCAAGTATGCTGACTTTTACAGCAGAAACCTGGGGCTGTGTTTTAGCCAGAATTGGATTTTTCTTTTCATTTGTAGGAACACATGCCTTACTTCCGGCTTCGAACAGCCAAGGAAATCTTGA 1554 0.4376 MAVTTSNRKRPQHWLIANRTHRSPNSSDSHGSKRPRFSAMPKSSTPSLSSSTSAGSRISRYPHSMPPLRREVHAPCRPQKFVSFDVSRTELSLRNAPKEDIDNGRVNALRKYQQARNDALASIRFIEVDSDSDSHSEGVSEDSTVQEVHVVEEDGGEGPSMVTEQRRQESDVVVTEIIHDLDAKVVAEGGLMQQSTPSAVSELSNSNLDVFNTGKMLDNLSLSPKHDLSSVRDYKKSFESVGKRMDALQRLNFEIQLNEKRRATFDLLRPKKELEVPLEPFFPLTKEEKAEIMHAFSANRNKILVTHEKSNIEISVENFWCLRPRAWLNDEVINLYLELLKERENRETQKFLNCHFFNSFFYKRLISGENGYDFNSVRRWTSQKKLGYGLHECDKIFVPIHQENHWCLAVINQRDKKFQYLDSLKGMDTHVLKVLARYFVDEVKDKTGKNIDVSSWEKEFVEDLPEQKNGYDCGVFMIKYADFYSRNLGLCFSQNWIFLFICRNTCLTSGFEQPRKS* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2681 517 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 1 503 - -
Dod05g2681 517 ProSiteProfiles Ubiquitin-like protease family profile. 312 484 IPR003653 GO:0006508|GO:0008234
Dod05g2681 517 Gene3D Adenoviral Proteinase; Chain A 275 505 - -
Dod05g2681 517 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 1A 1 503 - -
Dod05g2681 517 MobiDBLite consensus disorder prediction 1 59 - -
Dod05g2681 517 MobiDBLite consensus disorder prediction 1 70 - -
Dod05g2681 517 SUPERFAMILY Cysteine proteinases 280 498 IPR038765 -
Dod05g2681 517 Pfam Ulp1 protease family, C-terminal catalytic domain 327 488 IPR003653 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2681 Dod-Chr5 52973413 52978494 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2681 K08592 - gmx:100805645 620.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2681 05 52973413 52978494 Dod05g2681 05 52973413 52978494 ECH
Dod05g2681 05 52973413 52978494 Dod03g1327 03 16854855 16864376 PCT