Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1327 ATGATGTTATGTGTGATTTTGGGGAAAGAGGAAGTAAATTATGTTATGTGTGATTTTGGGGAAAGAGGAACTGAGCACCAAAGCTCAGCAAAAGGGAAGGATTTTGAAGGCGACGATGGAAACCAAGAGCAACAAGAAGGAAAAGTGACAGAGATTGAGGTATTAGTTGGTGATTCCTTGCATTGCATGCCACTGAGTTACGTTGCAATTCTCACAGAAAAAAACGACCCAGATTGTCCTCCTCCACCGCCACCGCCACCGCCTCCGCCTCTATACCCACCCGACCCGTTTCTTCCACCACCACCGGTTACCGGATCTCCCGGTACCCCGAACCGAAAGCAACCCTTGGGCAGGGAGGTTCACGCCCCTTGCAGGCCCAAAAAATTTGACCTCGTAGCTAGACCTGAATCCCCGATCTTCGTCGCTAGGGTTACCGGAAAATCTCCGAAGGAGGACAACGACGAAATGGGGAACTTTGTTGCGCGAAATTTCCGGAATGCCCTTGCCGCGTTGGGTTCGTTAGGGAAGGGGAAGAAGGAGGAGGAGGAGGAGGAGGAGGATGTGGAGGTTATGGAATTGGACAGTGATGACCGCAGGGACGAGGATGTTACGGAAGTAGGCAGGTCCCTGGTTACGGAGGAGCTCGTGGAAGCTAAGGTTGTTGTTGATGGTGGAAAGTCAACGTCTTCAGTGGATTCGGAGTTGACTAATAATGGTTTGAAGGTTGTGAATGAAGTGGGGAAGGGTTTGGAGTCTCTGGCTCTGATCAATGAGCGTGACCTTGCGGATGTTCATGTGTATAAGAAGTTGCTTGCCGATGCTGGAAGAAGAAACCCCAAGATTGAGTGGCTTGACTTCCAAATCGACCTGCACGAGAAGCGCAGGGCTGGGTTCGATTCATTTCGGCACAAGAAGGAGGAATCGGTGGGGGAAGTATGGCGCGAACCTTTTGTTGCTCTTACGGAGGAGGAAGAACATGAAGTTTCGAGTGCCTTTGAAGCCAACCGGAGGACGATCTTGGTTACTCATCAGGATTCCAACATCGAGATAACGGGAGAAAAGTTTCAGTGCCTTAGACGGGCAGCCTGGTTAAATGATGAGGTGATTAATTTGTACTTTGAGTTGCTGAAAGAAAGGGAGAAAAGGGAACCAAAGAAGTTTCTCAAATGCCATTTTTTCAATACTTTTTTCTACAAAAAGTTAATAAGTGGCAGGAATGGTTATGATTTCAAATCCGTCAGAAGATGGACCAGCCAAAGGAAATTGGGATACACTCTGATTGAATGTGATAAAATATTTGTACCTATCCATAAAGAGATCCATTGGTGCTTGGCTGTTATCAACAAGAAAGATGAGAAATTCCAATATCTTGATTCGTTGAATGGAATTGATAACCATGTGCTGACAGTGCTGGCTAGATATTTTGTGGATGAGGTGAAGGACAAGACTGGAAAAGATATCAATGTAAGTTCTTGGGAAAAAGAATTTGTTGAAGACCTTCCTATGCAGGAGAATGGGTATGATTGTGGGGTATTTATGATCAAGTATGCTGACTTCTATAGCAGAGGTCTGGGGCTGTGTTTTAACCAGGAACACATGCCTTACTTCCGGCGCAGGACAGCTAAGGAGATCTTGAGATTGAGAGCTGACTAA 1653 0.4646 MMLCVILGKEEVNYVMCDFGERGTEHQSSAKGKDFEGDDGNQEQQEGKVTEIEVLVGDSLHCMPLSYVAILTEKNDPDCPPPPPPPPPPPLYPPDPFLPPPPVTGSPGTPNRKQPLGREVHAPCRPKKFDLVARPESPIFVARVTGKSPKEDNDEMGNFVARNFRNALAALGSLGKGKKEEEEEEEDVEVMELDSDDRRDEDVTEVGRSLVTEELVEAKVVVDGGKSTSSVDSELTNNGLKVVNEVGKGLESLALINERDLADVHVYKKLLADAGRRNPKIEWLDFQIDLHEKRRAGFDSFRHKKEESVGEVWREPFVALTEEEEHEVSSAFEANRRTILVTHQDSNIEITGEKFQCLRRAAWLNDEVINLYFELLKEREKREPKKFLKCHFFNTFFYKKLISGRNGYDFKSVRRWTSQRKLGYTLIECDKIFVPIHKEIHWCLAVINKKDEKFQYLDSLNGIDNHVLTVLARYFVDEVKDKTGKDINVSSWEKEFVEDLPMQENGYDCGVFMIKYADFYSRGLGLCFNQEHMPYFRRRTAKEILRLRAD* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1327 550 Pfam Ulp1 protease family, C-terminal catalytic domain 363 544 IPR003653 GO:0006508|GO:0008234
Dod03g1327 550 MobiDBLite consensus disorder prediction 23 46 - -
Dod03g1327 550 SUPERFAMILY Cysteine proteinases 316 548 IPR038765 -
Dod03g1327 550 MobiDBLite consensus disorder prediction 73 120 - -
Dod03g1327 550 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 225 548 - -
Dod03g1327 550 MobiDBLite consensus disorder prediction 76 108 - -
Dod03g1327 550 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 1A 225 548 - -
Dod03g1327 550 MobiDBLite consensus disorder prediction 24 46 - -
Dod03g1327 550 SUPERFAMILY Formin homology 2 domain (FH2 domain) 80 90 - -
Dod03g1327 550 ProSiteProfiles Ubiquitin-like protease family profile. 348 520 IPR003653 GO:0006508|GO:0008234
Dod03g1327 550 MobiDBLite consensus disorder prediction 175 202 - -
Dod03g1327 550 MobiDBLite consensus disorder prediction 182 199 - -
Dod03g1327 550 Gene3D Adenoviral Proteinase; Chain A 306 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1327 Dod-Chr3 16854855 16864376 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1327 K08592 - gmx:100797013 487.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2681 05 52973413 52978494 Dod03g1327 03 16854855 16864376 PCT