Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2562 ATGAGAAGGGGCTCAACCTCACTGTCCTCATTTTCACTCCACATTCTGCTTCTGTCTAGTTTTTTATTCCCACTATCCCACTCTTCTGTCCTTTGGAACGATGAGGAGGATGGTGATTTGATAGACCAGATATGCAAGAAGACACCCTTTTATGACCTCTGCAGCAATATCCTACACTCAAATCCTCTGACCCCAAAAACTGATCCAAAGGGTATGGCCCTCATAATGGTCAACAACATTGAGAAAAATGCCACTGACACACTGGACTACATTCAAGAGTTGATCAAGCAGACCTCAGACCAGCAATTGGAGCAAGAGTTGGCTTTCTGTGCAGAGTCATACATCCCAGTTGTGAGATACATTCTGCCACAAGCAGCTGATGCCATAAACCAAGGTAGATTTGGGTTTGCAAGTTACTGCATATCTGATGCTGAGAAGGAAGTGGATGCTTGCAACAAGAAGTTCTCAGGTCCATCACCCTTAGGAGATAGGAACAGCATTATGCAGAAGCTGGTGGATGTGGCTGCAGCAATTGTAAAACTATTATCAAATGGCTGA 558 0.4427 MRRGSTSLSSFSLHILLLSSFLFPLSHSSVLWNDEEDGDLIDQICKKTPFYDLCSNILHSNPLTPKTDPKGMALIMVNNIEKNATDTLDYIQELIKQTSDQQLEQELAFCAESYIPVVRYILPQAADAINQGRFGFASYCISDAEKEVDACNKKFSGPSPLGDRNSIMQKLVDVAAAIVKLLSNG* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2562 185 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 185 - -
Dod05g2562 185 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 10 185 - -
Dod05g2562 185 Gene3D Invertase/pectin methylesterase inhibitor family protein 36 182 IPR035513 -
Dod05g2562 185 Pfam Plant invertase/pectin methylesterase inhibitor 39 178 IPR006501 GO:0004857
Dod05g2562 185 SMART PMEI_2 36 178 IPR006501 GO:0004857
Dod05g2562 185 TIGRFAM PME_inhib: pectinesterase inhibitor domain 10 182 IPR006501 GO:0004857
Dod05g2562 185 CDD CIF_like 39 182 IPR034087 GO:0004857|GO:0043086
Dod05g2562 185 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 38 182 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2562 Dod-Chr5 51891531 51892364 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2562 - - gmx:100788167 260.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2562 05 51891531 51892364 Dod03g1195 03 14920816 14921547 PCT