Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1195 ATGGGGAGGGGCTCAACCTATGTGTCTTGTTATGCACTTCACATTATTCTCCTTGCTTCTATTCCCTTCACACTGTCCCAAACCTATGTCCAGTGGAATGATAGGGGTGGAGATTTGATAGACCAAATTTGCAAAAAGACACCCTTTTATGATCTATGCAGCTCCACACTACACTCAAACCCTTTAAGCCCCAAAACTGATATCAAAGGGGTGGCATTCATAATGGTTAACAACATTCTGGCAAATGCAAGTGACACACTGAGTTACATTGAAGGGCTGATCAAGCAGACCAAAGACCCTCAGTTGGAGCAAGCATTGGCCTTCTGTGCTGAGTCATACATCCCAGTTGTGAGGTACACTCTCCCACAAGCAGCTGATGCCATAAGCCAAGGGCGTTTTGGGTTTGCCAGTTACTGCATTTCTGATGCTGTAAAGGAGGTGAATTCCTGTGACAAGAAATTCTCTGGATCAACTCAGTCACCTTTAGGTGATAGAAATGACATTGTGCTAAAGCTGGTTGATGTGGCTTCTGCCATAATCAAGCTACTATTGAAGGGCTGA 561 0.4456 MGRGSTYVSCYALHIILLASIPFTLSQTYVQWNDRGGDLIDQICKKTPFYDLCSSTLHSNPLSPKTDIKGVAFIMVNNILANASDTLSYIEGLIKQTKDPQLEQALAFCAESYIPVVRYTLPQAADAISQGRFGFASYCISDAVKEVNSCDKKFSGSTQSPLGDRNDIVLKLVDVASAIIKLLLKG* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1195 186 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 11 186 - -
Dod03g1195 186 SMART PMEI_2 35 179 IPR006501 GO:0004857
Dod03g1195 186 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 186 - -
Dod03g1195 186 Pfam Plant invertase/pectin methylesterase inhibitor 38 179 IPR006501 GO:0004857
Dod03g1195 186 TIGRFAM PME_inhib: pectinesterase inhibitor domain 13 183 IPR006501 GO:0004857
Dod03g1195 186 CDD CIF_like 38 183 IPR034087 GO:0004857|GO:0043086
Dod03g1195 186 Gene3D Invertase/pectin methylesterase inhibitor family protein 36 184 IPR035513 -
Dod03g1195 186 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 38 183 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1195 Dod-Chr3 14920816 14921547 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1195 - - gmx:100527840 294.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1195 03 14920816 14921547 Dod03g1195 03 14920816 14921547 ECH
Dod05g2562 05 51891531 51892364 Dod03g1195 03 14920816 14921547 PCT
Dod03g1195 03 14920816 14921547 Dod05g2561 05 51889286 51889576 PCT