Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2547 ATGGTGTTGGCTTCCCCAAACCCAATCAAGAGTGATAGGATTTTATCCACAAATGACCTTCCCATGGTGGACCTTAAGGAGGAAAGGTCGGTGGTGGCAAAGCTCATTGTGAAAGCTTGTGAAGACTATGGTTTCTTCAAGGTGATCAACCACGGTATCACCAATGAAACCATAGCCAAAATAGAAGAAGCAGGGTTTGGTTTCTTCTCCAAAACAGTGACACAAAAGAAACAAGCTGCACCTGCTTATGGATGCAAGAACATAGGCTTCAATGGGGACATAGGTGAGGTTGAGTACCTTCTTCTGAATGCTAGCACTCCTTCCATTGCTCAGATATCCAAAAGCATATCCAATGACCCTTCAAACTTCAGCTCTATAGTGAGTGCTTACACAGAAGCAGTGAGGGAGCTAGCATGTGAGATTTTGGAGCTAATGGCAGAGGGCCTGGGGGTCCCGGACACATCGGTATTCAGCAGGTTGATCAGGGATGTTGATAGCGACTCAGTCCTGAGGCTCAATCACTACCCACCTATACACTGCAAGGATAGGGACAAGTCTCCTTCCTACAACTATGCCAAGGTTGGCTTTGGGGAGCATTCTGACCCTCAGATCCTCACTATCCTCAGATCCAACGATGTGGGTGGCCTTCAAATCTCTCTTCAAGATGGGGTGTGGATCCCAGTCACTCCTGACCCATCAGCTTTCTGTGTTAATGTGGGTGATGTACTAGAGGTTATGACAAATGGAAGATTTGTGAGCGTGAGGCATAGGGCTATGACCAACTCATACAAATCTAGGATGTCAATGGCATATTTTGGGGCTCCACCACTGAATGCTTGCATTGTTGCTCCACCAGTTATGGTTACACCGCAGAGGCCCTCTCTTTTCCGACCATTCACCTGGGCCGACTACAAGAAAGCCACCTACTCGCTGAGGCTTGGAGACAGCCGCATTGACCTTTTCAGAAATTGCAAACAAGTGGAGTAA 987 0.4742 MVLASPNPIKSDRILSTNDLPMVDLKEERSVVAKLIVKACEDYGFFKVINHGITNETIAKIEEAGFGFFSKTVTQKKQAAPAYGCKNIGFNGDIGEVEYLLLNASTPSIAQISKSISNDPSNFSSIVSAYTEAVRELACEILELMAEGLGVPDTSVFSRLIRDVDSDSVLRLNHYPPIHCKDRDKSPSYNYAKVGFGEHSDPQILTILRSNDVGGLQISLQDGVWIPVTPDPSAFCVNVGDVLEVMTNGRFVSVRHRAMTNSYKSRMSMAYFGAPPLNACIVAPPVMVTPQRPSLFRPFTWADYKKATYSLRLGDSRIDLFRNCKQVE* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2547 328 Pfam non-haem dioxygenase in morphine synthesis N-terminal 20 79 IPR026992 -
Dod05g2547 328 SUPERFAMILY Clavaminate synthase-like 15 315 - -
Dod05g2547 328 PRINTS Isopenicillin N synthase signature 235 261 - -
Dod05g2547 328 PRINTS Isopenicillin N synthase signature 36 53 - -
Dod05g2547 328 PRINTS Isopenicillin N synthase signature 199 220 - -
Dod05g2547 328 PANTHER PLANT GIBBERELLIN 2-OXIDASE 3 323 - -
Dod05g2547 328 Pfam 2OG-Fe(II) oxygenase superfamily 167 273 IPR044861 -
Dod05g2547 328 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 165 275 IPR005123 -
Dod05g2547 328 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 3 323 - -
Dod05g2547 328 Gene3D - 4 312 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2547 Dod-Chr5 51758386 51762601 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2547 13 322 Glycosyltransferase AT5G59530 27.844 1.86e-30 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2547 K04125 - gmx:100783917 526.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2547 05 51758386 51762601 Dod05g2547 05 51758386 51762601 ECH
Dod05g2547 05 51758386 51762601 Dod03g1181 03 14781817 14790114 PCT