Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1181 ATGGTGGTGGCTTCAGCAAATTCAATCCAGCATCAGAGCGAAGAGGTTGTACCAATCAACCTTCCCGTGGTGGACTTAACTGCAGAGAGATCAATGGTGATGAAAGACATAGTGAAAGCATGTGAAGAATACGGTTTCTTCAACGTAATCAACCATGGTGTCCCTCATGAGACCATAGCCCAAATGGAAGAAGCGGGTTTTGATTTCTTTGCCAAGCCACTAGCCCAAAAGAGAGAAGCCACCGATGGTGGTGTTCCTTTTGGCTATGGCTGCAAGAACATAGGCTTCAATGGGGACATTGGTGAGGTCGAGTACCTTCTCTTCAATGCTAGTGCTCCTAATTCTATTGCTCAGCTGTCCCAAACCATCTCCAATGACCCATCAAACTTCAGGTCTAGGGTGAGTGCTTACACAGATGCAGTGAAGGAGCTGGCATGTGAGATTTTGGAGCTAATGGCAGAAGGGTTGGGGGTCCCTGATACAATTGTTTTCAGCAGGTTGATCAGGGAGACTGATAGTGACTCAGTCCTGAGGCTCAATCACTACCCACCTATACTTAACAAAGACTGCAGGGATGAGGACAAGTCTCACTCCCACAACCATACCAATACCATGGTTGTTGGCTTTGGAGAGCATTCTGACCCTCAGATCCTCACCATCCTCAGATCCAACGATGTTGGTGGCCTCCAAATCTCTCTTCAAAATGGTGTGTGGAACCCAGTCACTCCTGACCCCTCAGCTTTCTGTGTTAATGTGGGTGATTTACTGCAGGTTATGACAAATGGAAGATTTGTGAGCGTGAGACACAGGGCCGTGACCAACTCACACAAGCCTCGGATGTCGATGGCATACTTTGGGGCCCCACCACTTCATGCCTGCATAGTTGCTTCCCCAGTTATGGTTACACCAGAGAGGCCCTCCCTGTTCAGCCCATTCACTTGGGCTGAATACAAGAAAGCCACCTACTCTCTTAGGCTTGGAGACAGCCGCATTGACCTTTTCAGGAAGCGTACACAGTAG 1020 0.4863 MVVASANSIQHQSEEVVPINLPVVDLTAERSMVMKDIVKACEEYGFFNVINHGVPHETIAQMEEAGFDFFAKPLAQKREATDGGVPFGYGCKNIGFNGDIGEVEYLLFNASAPNSIAQLSQTISNDPSNFRSRVSAYTDAVKELACEILELMAEGLGVPDTIVFSRLIRETDSDSVLRLNHYPPILNKDCRDEDKSHSHNHTNTMVVGFGEHSDPQILTILRSNDVGGLQISLQNGVWNPVTPDPSAFCVNVGDLLQVMTNGRFVSVRHRAVTNSHKPRMSMAYFGAPPLHACIVASPVMVTPERPSLFSPFTWAEYKKATYSLRLGDSRIDLFRKRTQ* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1181 339 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 172 288 IPR005123 -
Dod03g1181 339 SUPERFAMILY Clavaminate synthase-like 18 328 - -
Dod03g1181 339 PRINTS Isopenicillin N synthase signature 248 274 - -
Dod03g1181 339 PRINTS Isopenicillin N synthase signature 212 233 - -
Dod03g1181 339 PRINTS Isopenicillin N synthase signature 37 54 - -
Dod03g1181 339 Gene3D - 3 325 IPR027443 -
Dod03g1181 339 Pfam 2OG-Fe(II) oxygenase superfamily 174 286 IPR044861 -
Dod03g1181 339 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 5 336 - -
Dod03g1181 339 PANTHER PLANT GIBBERELLIN 2-OXIDASE 5 336 - -
Dod03g1181 339 Pfam non-haem dioxygenase in morphine synthesis N-terminal 21 91 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1181 Dod-Chr3 14781817 14790114 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1181 7 335 Glycosyltransferase AT5G59530 27.874 3.96e-31 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1181 K04125 - gmx:100811043 490.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2547 05 51758386 51762601 Dod03g1181 03 14781817 14790114 PCT