Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2450 ATGGTGGCCTGTTGTGTACAATCTGGTTCTGTTTGTTACACTGGTTTTTTTTTTTTTTGTTTACTTCTATTTGTTAATTTAATTTTTGAAATGTTGTTGCAGGCAATGGCCACCGATCGTCTGACCCGTGTTCACAGTCTCCGTGAGAGGCTTGATGAAACCCTCACTGCCAACAGGAATGAAATTTTGGCCCTTCTCTCTAGGATTGAAGCCAAGGGCAAGGGAATCCTGCAACACCACCAGGTCATTCTTGAGTTTGAGGAAATGCCTGAGGAGAACAGACAGAAGCTAACTGATGGAGCTTTTGGAGAAGTTCTTAGATCTACTCAGGAAGCCATAGTTTTGCCACCATGGGTTGCTCTTGCTGTCCGTCCAAGGCCTGGTGTTTGGGAGTATCTTCGTGTGAATGTGCACGCCCTTGTTGTTGAGGAGTTGCAAGCTTGTGAGTACCTTCGCTTCAAGGAGGAGCTTGTTGATGGAAGTTCTAATGGCAACTTTGTGCTTGAGTTGGACTTTGAGCCATTTACAGCATCCTTCCCCCGCCCAACTCTCAACAAGTCAATTGGGAATGGTGTGCAGTTCCTCAACCGCCACCTTTCTGCAAAACTCTTCCACGACAAGGAGAGCTTGCATCCACTGTTGGAATTCCTCAGACTCCACAGCTACAAGGGAAAGACATTGATGTTGAATGACAGAATCCAGACCCCGGATTCTCTTCAACATGTTCTGAGGAAGGCTGAGGAGTACCTAGGCACACTCCCTTCTGAGACACCATACTCAGCATTCGAACACAAGTTCCAGGAGATTGGTTTGGAGAGAGGGTGGGGTGACACCGCAGAGCGTGTGCTCGAGTCTATCCAGCTCCTCTTGGACCTTCTTGAGGCCCCTGACCCTTGCACCCTTGAGACCTTCCTTGGAAGAATCCCTATGGTCTTCAATGTTGTCATCCTCTCCCCACATGGTTACTTCGCTCAAGATAATGTCTTGGGGTACCCTGACACTGGTGGCCAGGTTGTTTACATCTTGGATCAAGTTCGTGCTTTGGAGAATGAGATGCTCCATCGCATTAAGCAACAAGGCTTGGATATTGTACCTCGCATTCTCATTATCACACGTCTTCTCCCTGATGCTGTGGGAACTACTTGTGGCCAACGTCTTGAGAAGGTGTTTGGAACTGAGCATTGCCACATTCTTCGCGTTCCCTTCAGAAATGAGAAGGGAATTGTTCGCAAGTGGATCTCAAGATTCGAAGTCTGGCCCTACCTAGAAACTTACACTGAGGATGTTGCACATGAACTGGCCAAGGAGTTGCAAGGCAAGCCAGATCTGATTGTCGGAAACTATAGTGATGGAAACATTGTTGCCTCGTTGTTGGCACATAAATTAGGTGTCACTCAGTGTACAATTGCTCATGCACTTGAGAAGACCAAGTATCCCGAATCTGACATTTACTGGAAGAAATTCGAGGAGAAATATCACTTCTCCTGCCAATTCACAGCTGATCTTTTTGCCATGAACCACACTGACTTTATCATCACAAGTACCTTCCAAGAAATTGCTGGAAGCAAGGACACTGTTGGACAGTATGAGAGCCACACAGCATTCACCCTTCCAGGACTCTACCGTGTTGTCCATGGCATCGATGTCTTCGATCCAAAGTTCAACATTGTCTCCCCTGGAGCTGATCAAACCATTTACTTCAACTACACAGAAACTAGCCGCAGGTTGACATCATTCCACCCCGAGATTGAAGAGCTTCTCTACAGCTCAGTAGAGAATGAAGAACACATTTGTGTGTTGAAGGACCGCACCAAGCCAATCATCTTCACCATGGCAAGGCTTGACCGCGTGAAGAACATCACCGGGCTGGTCGAGTGGTATGGCAAGAACGCCCGCCTCCGTGAGCTTGTGAACCTTGTGGTGGTCGCTGGAGACAGGCGAAAGGAGTCCAAGGACTTGGAAGAGAAGGCCGAGATGAAGAAGATGTACGGCCTCATCGAGACCTACAAGCTCAATGGCCAATTCAGGTGGATCTCCTCGCAGATGAACCGCGTCAGGAACGGAGAACTGTACCGCGTGATCTGCGACACAAAGGGAGCATTCGTGCAGCCTGCAGTTTATGAAGCATTTGGTTTGACAGTGGTTGAGGCCATGACTTGTGGGTTGCCAACATTTGCAACATGCAATGGTGGCCCTGCTGAGATCATAGTTCATGGCAAGTCAGGGTTCCACATTGACCCTTACCATGGTGACCGTGCTGCTGAGCTCCTTGTTGACTTCTTTGAGAAGTGCACCGTTGACCCTTCTCACTGGGACAAGATCTCCCAAGGTGGTCTCCAGCGTATTGAAGAGAAGTACACATGGCAAATTTACTCTCAAAGGCTTCTGACTCTGACGGGTGTGTATGGCTTCTGGAAGCATGTGTCCAACCTTGACCGCCGTGAGAGCCGCCGTTATCTTGAGATGTTCTATGCTCTCAAGTACCGCAAATTGGCTGAGTCTGTGCCCCTTGCTGTTGAGGAGTAA 2526 0.4842 MVACCVQSGSVCYTGFFFFCLLLFVNLIFEMLLQAMATDRLTRVHSLRERLDETLTANRNEILALLSRIEAKGKGILQHHQVILEFEEMPEENRQKLTDGAFGEVLRSTQEAIVLPPWVALAVRPRPGVWEYLRVNVHALVVEELQACEYLRFKEELVDGSSNGNFVLELDFEPFTASFPRPTLNKSIGNGVQFLNRHLSAKLFHDKESLHPLLEFLRLHSYKGKTLMLNDRIQTPDSLQHVLRKAEEYLGTLPSETPYSAFEHKFQEIGLERGWGDTAERVLESIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLHRIKQQGLDIVPRILIITRLLPDAVGTTCGQRLEKVFGTEHCHILRVPFRNEKGIVRKWISRFEVWPYLETYTEDVAHELAKELQGKPDLIVGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPESDIYWKKFEEKYHFSCQFTADLFAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADQTIYFNYTETSRRLTSFHPEIEELLYSSVENEEHICVLKDRTKPIIFTMARLDRVKNITGLVEWYGKNARLRELVNLVVVAGDRRKESKDLEEKAEMKKMYGLIETYKLNGQFRWISSQMNRVRNGELYRVICDTKGAFVQPAVYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYHGDRAAELLVDFFEKCTVDPSHWDKISQGGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRRESRRYLEMFYALKYRKLAESVPLAVEE* 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2450 841 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 330 798 - -
Dod05g2450 841 Pfam Glycosyl transferases group 1 599 772 IPR001296 GO:0016757
Dod05g2450 841 Gene3D - 181 310 - -
Dod05g2450 841 Gene3D Glycogen Phosphorylase B; 562 788 - -
Dod05g2450 841 TIGRFAM sucr_synth: sucrose synthase 59 837 IPR012820 GO:0005985|GO:0016157
Dod05g2450 841 PANTHER SUCROSE SYNTHASE 36 840 - -
Dod05g2450 841 PANTHER - 36 840 IPR012820 GO:0005985|GO:0016157
Dod05g2450 841 Pfam Sucrose synthase 43 588 IPR000368 GO:0005985|GO:0016157
Dod05g2450 841 Gene3D - 60 180 - -
Dod05g2450 841 Gene3D Glycogen Phosphorylase B; 315 831 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2450 Dod-Chr5 50827969 50833522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2450 35 841 Glycosyltransferase AT3G43190 85.502 0.0 1443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2450 K00695 - gmx:547508 1569.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2450 05 50827969 50833522 Dod03g1623 03 22502400 22506332 PCT