Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1623 ATGGCCAGTGATCGCTTGACCCGCTCTCACTCTCTCAGGGAGAGGCTTGATGAGACTCTTACTGGTCACAGGAATGAAATTTTGGCCCTTCTAGCAAGGATCGAAGCCAAGGGCAAGGGGATCCTGCAGCACCACCAGCTCATTGCCGAGTGTGAGGCAATCCCTGAAGAGAATAGGCAGAAGCTAGTTGATGGGGCCTTTGGAGAAATTTTGAGATCCACACAGGAAGCCATAGTGTTGCCACCATTTGTTGCTCTGGCAGTTCGTCCAAGGCCTGGAGTTTGGGAGTATCTGCGAGTGGATGTTCACGGGCTTATTGTTGATGAGCTGCTTCCTGCTGAGTATCTCAAGTTCAAGGAGGAGCTTGTTGATGGAAGTTCCAATGGTAACTTCGTGCTTGAATTGGACTTTGAGCCATTTAACGCATCCTTTCCCCGTCCAACATTGAACAAGTCAATTGGGAATGGCGTGGAGTTCCTCAACCGCCACCTTTCTGCAAAGCTCTTTCATGACAAGGAGAGCATGCAGCCACTGCTGGAGTTCCTCAGGCTTCACAGTTACAAGGGAAAGACTATGATGTTGAATGACAGAATTCAAAACCTGAATTCTCTTCAACATGTTATGAGAAAGGCAGAGGACTATCTGGTCACCATTTCACCTGAAACACCCTACTCAGAATTCGAGCACAAATTCCAGGAGATCGGTCTGGAGAGAGGATGGGGTGACAACGCTGAGCGTGTCCTCGAGATGATTCAGCTTCTCTTGGATCTTCTTGAGGCACCTGATCCTTTCACCCTTGAGAAATTCCTAGGAAGGATCCCTATGGTCTTTAATGTTGTCATCCTTTCTCCACATGGTTACTTTGCACAAGACAATGTCTTAGGATACCCTGATACTGGTGGCCAGGTTGTTTACATCTTGGATCAAGTTCGTGCCTTGGAGAACGAGATGCTCAATCGCATCAAGAAACAAGGCTTGGACATCATCCCTCGTATTCTCATTATCACCCGTCTTCTCCCCGATGCCGTAGGAACTACTTGTGGCCAACGTCTCGAGAAGGTATTTGGCACTGAACATTGCCACATTCTTCGAGTTCCCTTTAGAACAGAGAAGGGGATTGTTCGCAAATGGATCTCAAGATTCGAAGTCTGGCCCTATCTAGAAACTTACACAGAGGATGTTGCTCATGAACTTGCCAAAGAGTTGCAAGGCAAGCCAGATCTAATTGTTGGGAACTACAGTGATGGAAACATTGTTGCCTCTCTGTTAGCACATAAATTGGGTGTTACTCAGTGCACCATTGCTCATGCACTTGAGAAGACCAAATATCCTGAATCTGACATTTACTGGAAAAAATTCGAAGACAAATATCACTTCTCTTGCCAATTTACCGCTGATCTTTTTGCAATGAACCACACAGACTTCATTATCACCAGTACCTTCCAAGAAATTGCTGGAAGCAAGGATACTGTTGGTCAATATGAGAGTCACACTGCTTTCACCCTTCCTGGACTCTACCGTGTCGTACACGGTATTGATGTCTTTGATCCAAAGTTTAACATTGTCTCCCCTGGAGCTGACATGGACATTTACTTCCCATACACTGAAACTAAGCGTAGGTTGACATCCTTCCACCCTGAGATTGAAGAGCTTCTTTACAGCTCAGTAGAGAATGAGGAGCACATATGTGTATTGAAGGACCGCAACAAGCCAATCATCTTCACCATGGCGAGGTTGGACCGCGTGAAGAACATTACAGGACTTGTTGAGTGGTATGGCAAGAATGCACGCCTTAGAGAGTTGGTGAACCTTGTGGTCGTTGCTGGAGATAGGAGGAAGGAGTCAAAGGACTTGGAAGAGAAGGCTGAGATGAAGAAGATGTATGGCCTTATTGAGACCTACAAGTTGAACGGCCAATTCAGGTGGATTTCGTCTCAAATGAACCGAGTAAGGAACGGAGAGCTCTACCGTGTCATCTGCGACACCAGGGGCGCTTTCGTGCAGCCTGCTGTCTATGAAGCCTTTGGTTTGACTGTTGTTGAGGCCATGACTTGTGGTTTGCCAACATTTGCAACCTGCAATGGTGGCCCTGCTGAGATCATTGTGCATGGAAAATCTGGATTCAACATTGATCCCTACCACGGTGACCAAGCTGCTGAGCTCCTTGTTGATTTCTTTGAGAAGAGCAAGGCAGATCCATCTCACTGGGACAAAATCTCCCAGGGAGGTTTGAAGCGTATTCATGAGAAGTATACATGGCAGATTTATTCTGATAGGCTTCTGACTCTCACTGGTGTCTATGGCTTCTGGAAGCATGTGACTAACCTTGATCGCCGTGAGAGCAAGCGTTACCTCGAGATGTTCTATGCCCTCAAGTACCGCAAATTGGCTGAGTCTGTGCCCCTTGCTGTTGAGTAA 2418 0.4686 MASDRLTRSHSLRERLDETLTGHRNEILALLARIEAKGKGILQHHQLIAECEAIPEENRQKLVDGAFGEILRSTQEAIVLPPFVALAVRPRPGVWEYLRVDVHGLIVDELLPAEYLKFKEELVDGSSNGNFVLELDFEPFNASFPRPTLNKSIGNGVEFLNRHLSAKLFHDKESMQPLLEFLRLHSYKGKTMMLNDRIQNLNSLQHVMRKAEDYLVTISPETPYSEFEHKFQEIGLERGWGDNAERVLEMIQLLLDLLEAPDPFTLEKFLGRIPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLNRIKKQGLDIIPRILIITRLLPDAVGTTCGQRLEKVFGTEHCHILRVPFRTEKGIVRKWISRFEVWPYLETYTEDVAHELAKELQGKPDLIVGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPESDIYWKKFEDKYHFSCQFTADLFAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYTETKRRLTSFHPEIEELLYSSVENEEHICVLKDRNKPIIFTMARLDRVKNITGLVEWYGKNARLRELVNLVVVAGDRRKESKDLEEKAEMKKMYGLIETYKLNGQFRWISSQMNRVRNGELYRVICDTRGAFVQPAVYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFNIDPYHGDQAAELLVDFFEKSKADPSHWDKISQGGLKRIHEKYTWQIYSDRLLTLTGVYGFWKHVTNLDRRESKRYLEMFYALKYRKLAESVPLAVE* 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1623 805 Gene3D Glycogen Phosphorylase B; 527 753 - -
Dod03g1623 805 Gene3D - 25 145 - -
Dod03g1623 805 Gene3D Glycogen Phosphorylase B; 280 796 - -
Dod03g1623 805 PANTHER - 1 805 IPR012820 GO:0005985|GO:0016157
Dod03g1623 805 Gene3D - 146 275 - -
Dod03g1623 805 Pfam Glycosyl transferases group 1 564 739 IPR001296 GO:0016757
Dod03g1623 805 Pfam Sucrose synthase 8 553 IPR000368 GO:0005985|GO:0016157
Dod03g1623 805 PANTHER SUCROSE SYNTHASE 1 805 - -
Dod03g1623 805 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 295 763 - -
Dod03g1623 805 TIGRFAM sucr_synth: sucrose synthase 24 802 IPR012820 GO:0005985|GO:0016157
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1623 Dod-Chr3 22502400 22506332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1623 6 805 Glycosyltransferase AT3G43190 84.500 0.0 1426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1623 K00695 - gmx:100819730 1518.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1623 03 22502400 22506332 Dod03g1623 03 22502400 22506332 ECH
Dod05g2450 05 50827969 50833522 Dod03g1623 03 22502400 22506332 PCT