Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2403 ATGACTGGCATGGCAAAGGAGGAAGGGTCAGCTAGTCCTAGTTGGGGTGCTTCGTTTTTTACGCAGACAACAGAGGATGTGGCTAGGGCTGCTGCTGCTGCTGTTGATTCTCCAACGTCATCTGTGACATATTCATTGAAAGATGATAGTGGTGGTAGTCAATTCCAGAGGCTGCAGAATCAAGTTACAAAAATGATAAAGGGCTTTTCACGCCCTTCTGATGCTAAAAATGCATATTACAATCCTGAAATCCTGACTAGCCTGAAGCGTCAATGGGCTGCAAATTTTCAGTTGCAACACATGGACCATAGATCTTGGAAGGAGCCCTCACGGCTGTTTGAAAGCATGGTGGTTGTTGGCCTTCATCCTAGTTGTGATGTTCAGGCACTTCAAAGGCAGTATGTTGATAGAAAATTTGAAGGTTCAGGCAAATTTCGAAGTGCACTTGGTTACCAGAATCAATCCCGTATAGAACCCAGTATTGAACCCAATATTGAACCTCAGGTCTTATTTGCTTATCCTCCAGAAAAACAGCTGCCTCTTAAATGCAAGGATCTTCTTTCTTTCTGCTTCCCTGGAGGCTTGGAGGTTCGTGCTGTTGAGAGAACCCCTTCCATGAGTGAGTTGAATGAACTTCTTTTTGGGCAGGAACACATTAAACAAAGGGATCTGTCATTTGTGTTCCGGTTACAGAGTGCTGACAATTCAACACTTTATGGGTGTTGTGTCTTGGTTGAAGAACTAGTGCAAAAGCCTTCTGGATTGCTCTCTCCGATTTCTGATAAACAGCCACCTTACTCTTCTTTGAGACGTCATATATTCACCACACAGAGATGTTACTGCATTCTTTCAAGGCTTCCTTTTTTTGAATTGCACTTTGGTGTTTTAAATAGCATCTTCACACAAGAAAGGCTAGAGTGGTTGACAAAAAGCATTGGAGATCTAAATTTAGAATCTTTTGAAGGTAACTATGAGGATGAAAACTCTGACAGCAATACTGAGAATGTGTTGGTGAGTGATAGACCAATGGAAGACAAGCTTGATGAAAATCTAAGAAATTCTCAATCAAGTTTAAGAAATTCCACACCTGAAAGCATTGTCAGTGATGGTCACCCAGAGCAGCAAATGGTTAATGGGGAGCTGCAGATTGATGATGAGAGAATCAATGATGACAATGTTGTGCTAACTGATCCTGAAACTGATAGGGCAGCAGACGAAGGAGAATCTAGCCCTACAAATTCCAAGGATAGTGATCAGTATAGAGATGCTTTTGCATCAAACAAAAAATTAGAAGATAAGCATTTACCCAGTGCTATTTTGCCCCTTCTGCGCTATTGCCAATATGAAAGCTCTGAATCTTCCTGCAGTTTTCAAGGCTCACCTTCTGAAGACAGAAGTTTTAGGAGTGATGCTGATGATAATGAGACGGAAGAACCATCTTTCTCTGGTCAAGAGGATTCAAATGACTTACATGATATTCTTGAATGGGCAAAGGAAAATAATCATGGACCACTGCAGATTATAAGCGAGTATTACCGATTACAATGCCCTGCAAGGGGCTCAGCAATTAGATTTCATCCTTTGGAGCACCTGCATCCCTTGGAATATCATAGACTAGCTGAGACAGTTTTATGTCCTGCTGGTTCACCAAATGATTTGAAATCTTGCAGTACCGGTCTGAAGTTAGCTGATGCGCATAATGCTCTTTTGGCAGAGGAGGCAACTGCATTATCTATATGGGCTGTAGCATGCCTGTGTGGAAGCTTGAGACTTGAACATGTGTTAACATTCTTTGCAGGAGTTCTGCTAGAGAAGCAGATAGTTGTTCTCTGTTCTAATTTGGGAATCCTATCAGCTTCAGTCTTATCAGTTATTCCACTAATCCGTCCTTATCAATGGCAAAGCCTGCTAATGCCGGTTCTACCAAATGACATGCTTGAGTTTTTGGATGCTCCGGTCCCTTACGTAGTTGGTATCAAGAACAAGACCAGTGAAGTTCAGTCAAAGTTAACCAATGTTATTCTAGTTGATGCCAATAGAAACCAGGTGAAGTCACCAACAATCCCACAACTGCCTAGGCAGAGAGAGCTTGTCTCTTCTTTACGCCCTTATCATGCAACTCTTGTAGGGGAAAGTTACATGGGTAGGAGAAGGCCAGTGTATGAATGCACAGAAGTGCAGATTGAAGCTGCTAAGGGGTTCCTTTCGGTGTTAAGATCTTACTTGGATTCTCTTTGCTATAACATCCGTTCTCACACAATTACCAATGTACAATCCAATGATGATAAGGTATCCTTGCTTTTGAAGGAGAGTTTCATTGAGTCGTTCCCTTATCGTGATCGGCCTTTTATGAAGCTTTTTGTGGATACACAGCTCTTTTCTGTACATACAGATATTGTTCTCTCTTTCTTCCAAAAGGAATAG 2424 0.4183 MTGMAKEEGSASPSWGASFFTQTTEDVARAAAAAVDSPTSSVTYSLKDDSGGSQFQRLQNQVTKMIKGFSRPSDAKNAYYNPEILTSLKRQWAANFQLQHMDHRSWKEPSRLFESMVVVGLHPSCDVQALQRQYVDRKFEGSGKFRSALGYQNQSRIEPSIEPNIEPQVLFAYPPEKQLPLKCKDLLSFCFPGGLEVRAVERTPSMSELNELLFGQEHIKQRDLSFVFRLQSADNSTLYGCCVLVEELVQKPSGLLSPISDKQPPYSSLRRHIFTTQRCYCILSRLPFFELHFGVLNSIFTQERLEWLTKSIGDLNLESFEGNYEDENSDSNTENVLVSDRPMEDKLDENLRNSQSSLRNSTPESIVSDGHPEQQMVNGELQIDDERINDDNVVLTDPETDRAADEGESSPTNSKDSDQYRDAFASNKKLEDKHLPSAILPLLRYCQYESSESSCSFQGSPSEDRSFRSDADDNETEEPSFSGQEDSNDLHDILEWAKENNHGPLQIISEYYRLQCPARGSAIRFHPLEHLHPLEYHRLAETVLCPAGSPNDLKSCSTGLKLADAHNALLAEEATALSIWAVACLCGSLRLEHVLTFFAGVLLEKQIVVLCSNLGILSASVLSVIPLIRPYQWQSLLMPVLPNDMLEFLDAPVPYVVGIKNKTSEVQSKLTNVILVDANRNQVKSPTIPQLPRQRELVSSLRPYHATLVGESYMGRRRPVYECTEVQIEAAKGFLSVLRSYLDSLCYNIRSHTITNVQSNDDKVSLLLKESFIESFPYRDRPFMKLFVDTQLFSVHTDIVLSFFQKE* 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2403 807 SMART uDENN_cls 109 246 IPR005113 -
Dod05g2403 807 MobiDBLite consensus disorder prediction 322 373 - -
Dod05g2403 807 MobiDBLite consensus disorder prediction 398 419 - -
Dod05g2403 807 PANTHER SUPPRESSION OF TUMORIGENICITY 5 ST5 1 807 - -
Dod05g2403 807 SMART DENN_cls 275 681 IPR001194 -
Dod05g2403 807 PANTHER DENN (AEX-3) DOMAIN PROTEIN 1 807 - -
Dod05g2403 807 ProSiteProfiles Tripartite DENN domain profile. 150 807 IPR037516 -
Dod05g2403 807 MobiDBLite consensus disorder prediction 398 412 - -
Dod05g2403 807 Pfam DENN (AEX-3) domain 536 679 IPR001194 -
Dod05g2403 807 MobiDBLite consensus disorder prediction 453 487 - -
Dod05g2403 807 Gene3D - 100 312 - -
Dod05g2403 807 Gene3D - 578 743 IPR043153 -
Dod05g2403 807 MobiDBLite consensus disorder prediction 353 372 - -
Dod05g2403 807 Pfam uDENN domain 167 244 IPR005113 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2403 Dod-Chr5 50290198 50301050 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2403 - - gmx:100801645 1289.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2403 05 50290198 50301050 Dod05g2403 05 50290198 50301050 ECH
Dod05g2403 05 50290198 50301050 Dod03g1567 03 21375861 21388188 PCT