Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1567 ATGACTGGAATGGCTAAGGAGGAAGAGTCAGGTAGTCCTGGTTGGGGTGCTTCATTTTTTATGCAGACAACTGACGATGTGGCTCGAGCTGTAGCTGCTGCTATGAATTCTCAAAGGCCATCTGTGATATATTCATCAAAAGATGATCATGGTGGCAGTCAGCTTCAAAGGCTGCAGTATCAAGTTACAAACATGATAAAGGGATTTTCACGCCCTGCTGAAGTTAAATATACAAATTACAATCCAGAAATCCTGACAAGCCAGAAGCGTCAATGGGCTGCAAACTTTCAGTTGCAGTGCATGGACCACAAGTCTTGGAAGGAGCCGACAAGGCTGTTTGAAAGCATGGTGGTTGTTGGACTTCATCCTAATTGTGATATTCAGGCACTGCAAAGGCAATATGTTGATAGGAAATCCGAAGGCTCTGGTAAATTGAGAAGTGCACTTGGTTATCAGAATCAATCTCATGTAGAACCAAATCTTGAACCTCAGGTCTTATTTGTTTACCCTCCAGAAAAACAGCTGCCTCTTAAAGACAAAGATCTACTTTCTTTCTGCTTCCCTGGAGGCCTGGAGGTTCATGCTGTTGAGAGAACCCCTTCCATGAGTGAGTTGAATGAAATTCTTTTTGGGCAGGAACACCTTAAACAAAGGGATCTGTCATTTGTATTTAGGTTACAGGGTGCTGACAATTCAACACTTTATGGGTGCTGTGTGCTGGTTGAAGAATTAGTGCAAAAGCCCTCTGGATTGTTCTCCCTGATTTCCGATAAGCAGTCATCTTACTCTTCCTTGAGACGCCATATATTAACCACACAGAGATGTTACTGCATTCTCTCAAGGCTCCCATTTTTCGAATTGCATTTTGGTGTATTGAATAGCATCTTCACACAAGAAAGGCTAGAGTGGTTGACAAAAAGTGTTGGAGATTTAAATTTAGAATTTGTTGAAGGTAGTTATGAGGAGGAAAACACAGGGGGAAATTCAGAATGTATGTTGGTGAATGATGGACCGTTAGAAGATAGACTTGATGGAAATCCAAGGGTTTCTCAATCAAGCTTAAGAAATTCCTCACTGCAAAATAGTGAGGATGATAATAATCATCCTGATCAACAAATGGTTGATGGGGAGTTGCCTATATTAATGGAGAGAGTCAACGATGAAAATGTTGTGCCAATTGATCCTGAAAGTGACAGAAAGGCTGCCAAAGAAGAATCTAGCCCTATAACTTCTGAGGATAGTGATCTGTATGGAGATGCTTTTGCAACAAACAAACAATCCGAAGAAAAGCGTTTACCAAATGCTATTCTGCCACTCCTGCGGTATTGCCAGTATGAAAGCTCTGAATCTTCCTGCAGCTTTCAAGGTTCACCTTGTGAAGACAGAAATTTTAGGAGTGATGCTGATGATACCGAGACAGAAGATGCATCTTTCTCTGGCCAAGAGGATTTAAATGATCTACATGATATTCTTGAATGGGCTAAGGCAAATAACTGTGGGCCACTACAGATTATAAGTGAATATTACAGTCTAAGTTGCCCTGCAAGGGGATCAACACTTAGGTTTCATCCTTTGGAGCACCTGCATCCCTTGGAATATCACAGACCGCATGAGACAGTTCTACACCTCGCTGGCTCAATTGTTGATTTGAAATCTTGCAGTAAAGGTCTGGAATTAGCTGAGGCACATAACTCTCTTCTGGCTGAGGAGGAGGCAACTGCATTATCTATATGGGCTGTAGCATGCATATGTGGTACCTTGAGACTTGAAAATGTGCTAACATTCTTTGCAGGAGCTCTACTGGAGAAACAGATAGTTGTTGTCTGTTCTAATTTGGGAATCCTATCTGCTTCTGTTTTGTCAGTTATTCCACTGATCCGACCCTACCGATGGCAAAGCCTGTTAATGCCGGTTTTACCAAATGACATGCTTGAGTTTTTGGATGCACCTGTTCCTTATGTAGTTGGTATAAGGAATAAGACCAATGAAGTTCAGTCAAAGTTAACCAATGTTATTTTGGTTGATGCCAATAGAAATCAGGTGAAGTCACCAACAATACCTCAACTGCCAAGACAAAAGGAGCTAATGTCTTCTCTACGTCCTTACCATGCAACCCTTGTGGGAGAAAGTTACTTGGGCAGAAGAAGGCCAGTGTTTGAATGCACGGAAGTGCAGATTGAAGCTGCCAAGGGGTTCTTGTCAGTGTTAAGATCTTACTTGGATTCTCTTTGCTATAACATCCGTTCTCATACAATAACCAATGTACAATCTAATGATGATAAGGTCTGTATTTTTGTCTTTTGA 2304 0.4149 MTGMAKEEESGSPGWGASFFMQTTDDVARAVAAAMNSQRPSVIYSSKDDHGGSQLQRLQYQVTNMIKGFSRPAEVKYTNYNPEILTSQKRQWAANFQLQCMDHKSWKEPTRLFESMVVVGLHPNCDIQALQRQYVDRKSEGSGKLRSALGYQNQSHVEPNLEPQVLFVYPPEKQLPLKDKDLLSFCFPGGLEVHAVERTPSMSELNEILFGQEHLKQRDLSFVFRLQGADNSTLYGCCVLVEELVQKPSGLFSLISDKQSSYSSLRRHILTTQRCYCILSRLPFFELHFGVLNSIFTQERLEWLTKSVGDLNLEFVEGSYEEENTGGNSECMLVNDGPLEDRLDGNPRVSQSSLRNSSLQNSEDDNNHPDQQMVDGELPILMERVNDENVVPIDPESDRKAAKEESSPITSEDSDLYGDAFATNKQSEEKRLPNAILPLLRYCQYESSESSCSFQGSPCEDRNFRSDADDTETEDASFSGQEDLNDLHDILEWAKANNCGPLQIISEYYSLSCPARGSTLRFHPLEHLHPLEYHRPHETVLHLAGSIVDLKSCSKGLELAEAHNSLLAEEEATALSIWAVACICGTLRLENVLTFFAGALLEKQIVVVCSNLGILSASVLSVIPLIRPYRWQSLLMPVLPNDMLEFLDAPVPYVVGIRNKTNEVQSKLTNVILVDANRNQVKSPTIPQLPRQKELMSSLRPYHATLVGESYLGRRRPVFECTEVQIEAAKGFLSVLRSYLDSLCYNIRSHTITNVQSNDDKVCIFVF* 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1567 767 PANTHER DENN (AEX-3) DOMAIN PROTEIN 1 765 - -
Dod03g1567 767 MobiDBLite consensus disorder prediction 322 373 - -
Dod03g1567 767 MobiDBLite consensus disorder prediction 450 481 - -
Dod03g1567 767 Gene3D - 576 740 IPR043153 -
Dod03g1567 767 Gene3D - 100 308 - -
Dod03g1567 767 PANTHER SUPPRESSION OF TUMORIGENICITY 5 ST5 1 765 - -
Dod03g1567 767 MobiDBLite consensus disorder prediction 389 410 - -
Dod03g1567 767 MobiDBLite consensus disorder prediction 346 367 - -
Dod03g1567 767 ProSiteProfiles Tripartite DENN domain profile. 147 767 IPR037516 -
Dod03g1567 767 MobiDBLite consensus disorder prediction 389 418 - -
Dod03g1567 767 SMART uDENN_cls 109 242 IPR005113 -
Dod03g1567 767 SMART DENN_cls 271 679 IPR001194 -
Dod03g1567 767 Pfam uDENN domain 163 240 IPR005113 -
Dod03g1567 767 Pfam DENN (AEX-3) domain 573 677 IPR001194 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1567 Dod-Chr3 21375861 21388188 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1567 - - gmx:100782148 1290.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2403 05 50290198 50301050 Dod03g1567 03 21375861 21388188 PCT