Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2397 ATGGTCAACGGCCTCAGCTCCCTCGTCTCACTCGACCACGTCCTCCACCTCACCGTGGGCCCCATCCTACGCAACCGCTCCTCCTCCCTCTCCTTCACCCACATGCTCCACAGCCGCTACTCCTCCAAACAAGACCTCGATGCCTATTTGGCCCACCCCAGCCACGTCAGCATCGCCAAGGGCTCCGTCTTCCCCATCATCGACGACATCATGGCCGTCGATTGGGTCGCCCGCGACATCCCCTCCGGCGACGTCGTTCTGCCGCCGGGATCGGCGGTTAGGGTGAGCTTCCTGAAACTGAAGGACGACGCGGGCGATGAGGTTAAGGATGAGGTGTTGGGTGTGATCAGAGGGATCCCGGAGAGTTTCAAGGGGATCAGTCAGCTGAGTTGCGGGGAGAATTTCTCGCCCGCGAGCGCTAAGGGTTTCTCGATTGCGTTGCTCGCTGTTTCTCCCGGAACGAGGGAGATGGACGCGGTGCATTCGACCGAGGAGTTGGTGCAGTATCAGAAGGATAAGATTAGGGATCATTTGGAGAGTGTGGTGGTTGTTGATTATGTTGTGCCGCCGCGGCCACCTCTTCAGTCTGCAAGCCTTTGA 600 0.5917 MVNGLSSLVSLDHVLHLTVGPILRNRSSSLSFTHMLHSRYSSKQDLDAYLAHPSHVSIAKGSVFPIIDDIMAVDWVARDIPSGDVVLPPGSAVRVSFLKLKDDAGDEVKDEVLGVIRGIPESFKGISQLSCGENFSPASAKGFSIALLAVSPGTREMDAVHSTEELVQYQKDKIRDHLESVVVVDYVVPPRPPLQSASL* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2397 199 SMART Dabb_2 1 77 IPR013097 -
Dod05g2397 199 SMART Dabb_2 92 188 IPR013097 -
Dod05g2397 199 ProSiteProfiles Stress-response A/B barrel domain profile. 92 186 IPR013097 -
Dod05g2397 199 SUPERFAMILY Dimeric alpha+beta barrel 93 192 IPR011008 -
Dod05g2397 199 Gene3D - 1 76 - -
Dod05g2397 199 PANTHER STRESS-RESPONSE A/B BARREL DOMAIN-CONTAINING PROTEIN UP3 1 196 - -
Dod05g2397 199 ProSiteProfiles Stress-response A/B barrel domain profile. 1 75 IPR013097 -
Dod05g2397 199 Pfam Stress responsive A/B Barrel Domain 2 76 IPR013097 -
Dod05g2397 199 Pfam Stress responsive A/B Barrel Domain 94 188 IPR013097 -
Dod05g2397 199 Gene3D - 89 188 - -
Dod05g2397 199 SUPERFAMILY Dimeric alpha+beta barrel 4 80 IPR011008 -
Dod05g2397 199 PANTHER - 1 196 IPR044662 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2397 Dod-Chr5 50234973 50236553 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2397 - - gmx:100527770 279.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2397 05 50234973 50236553 Dod05g2397 05 50234973 50236553 ECH
Dod05g2397 05 50234973 50236553 Dod03g1563 03 21305033 21307558 PCT