Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1563 ATGCTCACCCTGAGAATCTGCCCTTCATTTTCCCCCTCATTTTCCCACACTTTCTCGCCATCCAAACAGCTCCTTCATCATTCTTCGTACCCTCCATCATCCAAGCCCCGCGCGATCAGGATCTCCTGCTCCTCACAAACCGTCGAGCACATCGTACTGTTCAACGTGAAGGCAGACACCGATCCCTCGAAGGTCAACGCCATGGTCAACGACCTCAGCTCCCTCGTAACCCTAGACAACGTCCTCCACCTCAACGTCGGCCCCATCCTCCGCCACCGCCACGCCACCACCGCCGCCGCTACAACCTCGCCGGAGCTCCGATTCACTCACATGCTCCACAGCAGGTACCGCTCCAAGGAGCATCTCGAAGCCTACAATGCGCATCCTAACCACGTCTCCGTCGTCAGGGGCTCCGTTTTCCCAATCGTCGACGACGTCATGGCCGTCGATTGGATCGGCGGCGGCGATGACGGCGGATCTCCTCTTCCAGCGCCGCCTCGTGGATCTGCGATTAGGGTAATGCTCTTGAGGCTGAAGGAGGAGGGCGAAGGAGACAAGGTTAAGGGGAAGGTTTTGAATGTCGCCGGAGGAATCAACGGCGGCGGCGCCAGAGAAATCGTTCAGGTGTCTTGCGGCGAGAATTTCTCGCCGGCGAGGGCGAAGGGATTCTCGGTGGCAACGCTTGCGGTTTTTACGGGACGGAGGGAATTGGAGAGGGTGGGGTTGGATGATGAGGGGTTGGAGTTGGAGAAGGTGAAGGAGCACGTGGAGAGTGTGTTGGCGGTTGATTACGTGGTTGCTTGA 804 0.5833 MLTLRICPSFSPSFSHTFSPSKQLLHHSSYPPSSKPRAIRISCSSQTVEHIVLFNVKADTDPSKVNAMVNDLSSLVTLDNVLHLNVGPILRHRHATTAAATTSPELRFTHMLHSRYRSKEHLEAYNAHPNHVSVVRGSVFPIVDDVMAVDWIGGGDDGGSPLPAPPRGSAIRVMLLRLKEEGEGDKVKGKVLNVAGGINGGGAREIVQVSCGENFSPARAKGFSVATLAVFTGRRELERVGLDDEGLELEKVKEHVESVLAVDYVVA* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1563 267 Gene3D - 41 152 - -
Dod03g1563 267 ProSiteProfiles Stress-response A/B barrel domain profile. 170 264 IPR013097 -
Dod03g1563 267 Pfam Stress responsive A/B Barrel Domain 48 151 IPR013097 -
Dod03g1563 267 Gene3D - 170 267 - -
Dod03g1563 267 PANTHER - 37 266 IPR044662 -
Dod03g1563 267 SUPERFAMILY Dimeric alpha+beta barrel 169 266 IPR011008 -
Dod03g1563 267 PANTHER STRESS-RESPONSE A/B BARREL DOMAIN-CONTAINING PROTEIN UP3 37 266 - -
Dod03g1563 267 SUPERFAMILY Dimeric alpha+beta barrel 46 152 IPR011008 -
Dod03g1563 267 SMART Dabb_2 170 266 IPR013097 -
Dod03g1563 267 SMART Dabb_2 48 153 IPR013097 -
Dod03g1563 267 ProSiteProfiles Stress-response A/B barrel domain profile. 48 151 IPR013097 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1563 Dod-Chr3 21305033 21307558 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1563 - - aprc:113852330 239.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2397 05 50234973 50236553 Dod03g1563 03 21305033 21307558 PCT