Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2271 ATGTCCGTTTCAATGAGAGATTTGGATCCAGCTTTCAAAGGAGCTGGACAAAAGGATGGACTTGAAATATGGCGTATTGAGAACTTTAATGCGGTTCCAATTCCTGCGTCTTCTTATGGGAAGTTTTTCACCGGAGACTCATACGTGATCTTAAAGACAACTGCTTCGAAAAGTGGTGCTCTGCGCCATGATATCCATTACTGGCTTGGTAAAGACACCAGTCAGGATGAAGCTGGTACTGCGGCTATCAAGACAGTTGAGTTGGATGCAGCTCTAGGAGGACGTGCTGTTCAGTATCGTGAAGTACAGGGTCATGAAACTGAAAAATTCCTGTCTTATTTCAAACCATGCATTATACCTCAAGAAGGTGGAGTTGCCTCTGGTTTTAAACATGCTGAGGCTGAAGAACATAAGACACGATTGTTCGAATGCAAAGGGAAGCATGTTGTACATGTTCCTTTTGCTCGATCTTCACTCAACCATGATGATGTCTTTATTCTTGATACTGAGTCCAAAATCTTCCAATTTAATGGTTCCAATTCATCTATTCAAGAAAGGGCTAAAGCATTGGAAGTTGTACAGTATATTAAGGATACTTATCATGATGGGAAATGTGATATAGCTGCTATTGGTAAGTGTAGAAATGCATTTCAAAGTTTTAAATGTGATTGCTTTGTATCAGGAATTGAATGTATATACTTGAACTTCATTGCAGAGGATGGAAAGTTGATGGCTGATTCTGAGAGTGGAGAATTCTGGGCTTTATTTGGGGGCTTTGCTCCTCTTCCACGAAAAACAGTCAGTGATGACGATAACTGTGCTGATTCTCATCCTTCAAAGCTGCTTTGTGTTGAAAAGGGGAAGGCAGAACCTATTGAAGCTGATTCTTTGGCAAGGGAATTAATGGAAACAAACAAATGCTATATTCTAGATTGTGGGTTGGAAGTGTTTGCGTGGATGGGAAGAAACACCTCCCTTGATGAAAGAAAAAGTGCAAGTGGAGCTGCGGAAGAGTTAGTAAATGGCACTGATCGACCAAAATCCCAGATAATTCGTGTAATTGAAGGATTTGAAACAGTGATGTTCAAGTCCAAGTTTGATTCTTGGCCTGAGACAGCTAATGTAACAGTGTCTGAAGAAGGTCGCGGCAAGGTAGCAGCTCTTCTAAAACGTCAAGGATTGGACGTCAAGGGTCTCTTGAAAGCTGAGCCAGTAAAAGAAGAACCTCAAGCCCACATAGATTGCACAGGACATTTGCAGGTTTGGCGTGTCAATGGTCAGGAAAAGATTGTTCTACCAGCCCCTGATCTGTCAAAATTTTATAGTGGAGATTGCTACATATTTCAGTATTCATATCCTGGAGAAGATAAGGAGGAGTTACTTGTTGGAACATGGATTGGAAATAATAGTGTTGAGGAAGAAAGAGCTTCAGCTCTTTCGATGGCAAGCAAAATGGTTGAGTCGATGAAATTTATTCCTTCCCTGGCACGTATTTATGAGGGCAGTGAAACAATCCAGTTTCATTCTATCCTCCAAAGCTTCATTGTATTTAAGGGTGGACTCAGTGATGGATACAAGAATTACGTTGCAGAAAAGGAAATTCCAGATGAGACATACAGTGAGGATGGTATTGCATTATTCCGCATCCAGGGCTCTGGACCAGAAAATATGCAAGCTATACAACTTGAACCAGTTGCTTCGTCCTTGAATTCCTCCTATTGCTACATACTTCATAATGGGGCCACTGTCTTTACTTGGTCTGGAAGTTTAACAACTTCAGATGACCACGAACTTGTTGAGAGAATGCTGGATTTGATAAAGCCGGATTTACAATGCAAACCACAAAAGGAAGGTGCAGAATCTGAACAGTTTTGGGATTTGTTAGGAGGAAAAACAGAATATACTAGTCAAAAGATTGTAAGGGACGCCGAGAATGATCCTCACCTATTTTCTTGCAACTTCTCAAAAGAGATACACAACTTTTCCCAGGATGACTTGATGACAGAAGATATCTTCATCTTGGATTGTCACTCTGAAATCCTTGTCTGGGTTGGTCAGGGAGTTGATCCCAAGAGTAGAATGCAGGCTCTAACAATTGGGGAGCAATTTCTTCAGCATGATTTTCTTCTAGAAAAATTATCTCGTGTCGCTCCAATATATGTTGTCATGGAAGGTTGTGAGCCACTTTTCTTCACTCGCTTCTTCAAATGGGAGGCTGCAAAATCTATGATGCTGGGCAACTCATTTCAAAGGAAGCTTACAATTGTGAGAAATGGGGGTACTCCACTATCGGTTAAACCAAAACGAAGACCATCTGCATCTTATGGTGGAAATAAATCCCAGCGTTCCGCCCGCAGCATGTCTGTTAGTCCTACACCTGATCGTGCCCGTGCGAGGGGCAGATCACCAGCCTTTAATGCAATAGCTTCTACTTTTGAGAATTCTAATAATGCTAGGAACCTTTCAACTCCACCTCCAATGATTAGAAAGCTGTATCCAAAATCTATGGCACCTGATTCAGTAAAACTGGCACATAAGTCTTCAGCCATAGCTCAGCTTACTTCTAGTTTTGAAATGTCTTCAGCACGAGAAAATTTAATACCTCGGTCATTGAAAGCAAGTTTAAATACATCCAAATCAAACCCCGAGACAAGTGACAGTGAGGAGTCTATGAGCAGCAGAATAGAGACTCTTACTATACAGGAAGCTACAACAGAGGGTGCAGCTGAAGAAGATGAAGGTCTCCCAGTTTATCCATACGAGCGCCTTAACACAGCTTCTACTGATCCCGCAACTGACATCGACGTGATTAGACGGGAGGTTTATCTGTCATCTGTGGAGTTCAAAGAGAAACTTGGGATGGCTAAGGATGACTTCTACAAGCTGCCGAAATGGAAACAAAACAAACTCAAAATGGCTGTTCAATTGTTCTGA 2934 0.4162 MSVSMRDLDPAFKGAGQKDGLEIWRIENFNAVPIPASSYGKFFTGDSYVILKTTASKSGALRHDIHYWLGKDTSQDEAGTAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGVASGFKHAEAEEHKTRLFECKGKHVVHVPFARSSLNHDDVFILDTESKIFQFNGSNSSIQERAKALEVVQYIKDTYHDGKCDIAAIGKCRNAFQSFKCDCFVSGIECIYLNFIAEDGKLMADSESGEFWALFGGFAPLPRKTVSDDDNCADSHPSKLLCVEKGKAEPIEADSLARELMETNKCYILDCGLEVFAWMGRNTSLDERKSASGAAEELVNGTDRPKSQIIRVIEGFETVMFKSKFDSWPETANVTVSEEGRGKVAALLKRQGLDVKGLLKAEPVKEEPQAHIDCTGHLQVWRVNGQEKIVLPAPDLSKFYSGDCYIFQYSYPGEDKEELLVGTWIGNNSVEEERASALSMASKMVESMKFIPSLARIYEGSETIQFHSILQSFIVFKGGLSDGYKNYVAEKEIPDETYSEDGIALFRIQGSGPENMQAIQLEPVASSLNSSYCYILHNGATVFTWSGSLTTSDDHELVERMLDLIKPDLQCKPQKEGAESEQFWDLLGGKTEYTSQKIVRDAENDPHLFSCNFSKEIHNFSQDDLMTEDIFILDCHSEILVWVGQGVDPKSRMQALTIGEQFLQHDFLLEKLSRVAPIYVVMEGCEPLFFTRFFKWEAAKSMMLGNSFQRKLTIVRNGGTPLSVKPKRRPSASYGGNKSQRSARSMSVSPTPDRARARGRSPAFNAIASTFENSNNARNLSTPPPMIRKLYPKSMAPDSVKLAHKSSAIAQLTSSFEMSSARENLIPRSLKASLNTSKSNPETSDSEESMSSRIETLTIQEATTEGAAEEDEGLPVYPYERLNTASTDPATDIDVIRREVYLSSVEFKEKLGMAKDDFYKLPKWKQNKLKMAVQLF* 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2271 977 SUPERFAMILY VHP, Villin headpiece domain 908 977 IPR036886 GO:0003779|GO:0007010
Dod05g2271 977 CDD gelsolin_S4_like 413 510 - -
Dod05g2271 977 SUPERFAMILY Actin depolymerizing proteins 620 736 - -
Dod05g2271 977 ProSiteProfiles Headpiece (HP) domain profile. 912 977 IPR003128 GO:0003779|GO:0007010
Dod05g2271 977 Gene3D Severin 638 751 IPR029006 -
Dod05g2271 977 CDD gelsolin_S6_like 646 737 - -
Dod05g2271 977 Gene3D Severin 545 637 IPR029006 -
Dod05g2271 977 MobiDBLite consensus disorder prediction 760 801 - -
Dod05g2271 977 MobiDBLite consensus disorder prediction 869 894 - -
Dod05g2271 977 Gene3D Villin headpiece domain 915 977 IPR036886 GO:0003779|GO:0007010
Dod05g2271 977 CDD gelsolin_S3_like 280 368 - -
Dod05g2271 977 Gene3D Severin 270 382 IPR029006 -
Dod05g2271 977 SMART VHP_1 942 977 IPR003128 GO:0003779|GO:0007010
Dod05g2271 977 Gene3D Severin 132 269 IPR029006 -
Dod05g2271 977 PANTHER VILLIN-4 238 977 - -
Dod05g2271 977 PANTHER VILLIN-4 1 212 - -
Dod05g2271 977 Pfam Villin headpiece domain 942 977 IPR003128 GO:0003779|GO:0007010
Dod05g2271 977 SMART VILL_6 279 369 IPR007122 GO:0051015
Dod05g2271 977 SMART VILL_6 544 631 IPR007122 GO:0051015
Dod05g2271 977 SMART VILL_6 19 117 IPR007122 GO:0051015
Dod05g2271 977 SMART VILL_6 137 259 IPR007122 GO:0051015
Dod05g2271 977 SMART VILL_6 647 738 IPR007122 GO:0051015
Dod05g2271 977 SMART VILL_6 417 514 IPR007122 GO:0051015
Dod05g2271 977 SUPERFAMILY Actin depolymerizing proteins 9 147 - -
Dod05g2271 977 MobiDBLite consensus disorder prediction 870 894 - -
Dod05g2271 977 CDD gelsolin_S5_like 542 633 - -
Dod05g2271 977 PANTHER VILLIN 238 977 IPR007122 GO:0051015
Dod05g2271 977 PRINTS Gelsolin family signature 348 369 IPR007122 GO:0051015
Dod05g2271 977 PRINTS Gelsolin family signature 461 479 IPR007122 GO:0051015
Dod05g2271 977 PRINTS Gelsolin family signature 692 711 IPR007122 GO:0051015
Dod05g2271 977 PRINTS Gelsolin family signature 617 636 IPR007122 GO:0051015
Dod05g2271 977 PRINTS Gelsolin family signature 494 514 IPR007122 GO:0051015
Dod05g2271 977 PRINTS Gelsolin family signature 663 685 IPR007122 GO:0051015
Dod05g2271 977 PRINTS Gelsolin family signature 557 577 IPR007122 GO:0051015
Dod05g2271 977 PRINTS Gelsolin family signature 436 452 IPR007122 GO:0051015
Dod05g2271 977 SUPERFAMILY Actin depolymerizing proteins 536 638 - -
Dod05g2271 977 SUPERFAMILY Actin depolymerizing proteins 129 269 - -
Dod05g2271 977 SUPERFAMILY Actin depolymerizing proteins 407 553 - -
Dod05g2271 977 PANTHER VILLIN 1 212 IPR007122 GO:0051015
Dod05g2271 977 MobiDBLite consensus disorder prediction 774 790 - -
Dod05g2271 977 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 278 452 IPR036180 -
Dod05g2271 977 CDD gelsolin_S1_like 12 124 - -
Dod05g2271 977 Pfam Gelsolin repeat 295 362 IPR007123 -
Dod05g2271 977 Pfam Gelsolin repeat 29 111 IPR007123 -
Dod05g2271 977 Pfam Gelsolin repeat 657 727 IPR007123 -
Dod05g2271 977 Pfam Gelsolin repeat 149 197 IPR007123 -
Dod05g2271 977 Gene3D Severin 7 131 IPR029006 -
Dod05g2271 977 Gene3D Severin 405 544 IPR029006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2271 Dod-Chr5 48826520 48834812 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2271 - - gmx:100807762 1592.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2271 05 48826520 48834812 Dod03g1753 03 25927140 25929806 PCT
Dod03g1429 03 18652885 18666896 Dod05g2271 05 48826520 48834812 PCT