Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1429 ATGGCTGTTTCCATGAGAGATTTGGATCCAGCTTTCCAGGGGGCTGGACAAAAGGCCGGACTTGAAATATGGCGTATTGAGAATTTTAATCCAGTTCCTGTCCCTAAGTCCTCTTATGGGAAGTTTTTCACTGGGGACTCCTATGTGATCTTAAAGACAACTTCATCAAAAAGTGGTGCTCTGCGTCATGATATCCATTACTGGCTCGGTAAAGACACCAGTCAGGATGAAGCTGGTGCTGCAGCCATCAAGACAGTTGAGCTGGACGCAGCTCTTGGAGGACGTGCTGTTCAGTATCGGGAAGTACAGGGCCATGAAACTGAAAAGTTCCTGTCTTATTTCAAACCATGTATTATACCACAAGAAGGCGGAGTTGCTTCTGGTTTTAAACATGCCGAGGCTGAACAACATAAGATACGGTTATTTGTATGCAGAGGGAAACATGTTGTACATGTCAAAGAGGTTCCTTTTGCTCGATCTTCACTCAACCATGATGATATTTTTGTTCTGGATACGGAGTTAAAGATCTTCCAATTTAATGGTTCCAATTCATCTATTCAAGAAAGGGCTAAAGCTTTGGAAGTTGTACAGTATATTAAGGATACCTACCATGAGGGAAAATGTGAGGTTGCTGCTATTGAGGATGGAAAGTTGATGGCTGATCCTGAAACTGGAGAATTCTGGGGTTTCTTTGGGGGATTTGCTCCTCTTCCACGGAAAACAGCTGGTGAAGATGACAAGCCTGCTGATTCTCACTCACCAAAGCTGTTCAGTGTTGAAAAGGGACAGGCAGAACCCCTTGAAGCTGATTCCTTGAAAAGGGAATTACTGGATACAAATAAATGCTACATTCTTGATTGTGGGTTGGAAGTGTTTGTCTGGATGGGAAGAAACACCTCTCTTGATGAAAGAAAAAGCGCAAGTGGAGTAGCAGATGAATTAGTCAGTGGAACTGATAAACTGAAACCTCAAATAATCCGTGTAATTGAAGGATTTGAAACAGTAATGTTCAAGTCCAAGTTTAATTCTTGGCCTCAGACCACTGATGTAACAGTATCTGAAGATGGTCGTGGCAAGGTAGCAGCACTACTAAAACGACAAGGAGTGAATGTCAAGGGCCTGTTGAAAGCTGATCCAGTAAAGGAAGAACCTCAACCCTTCATCGATTGTACGGGACATTTGCAGGTTTGGCGCGTGAATGGTCAGGAAAAGATTCTTCTTCAAGCTTCTGATCAATCAAAATTTTATAGTGGGGATTGCTACATCTTTCAGTATACATACCCTGGAGAAGATAAGGAAGATTGCCTTATAGGAACATGGATTGGAAAAAATAGTGTTGAGGAAGACAGAGCTTCAGCTAATTCACTGGCAAGCAAAATGGTTGAGTCGATGAAGTTCCTGGCTTCCCAGGCTCGTATATATGAAGGCAATGAACCGATTCAATTTTATTCTATCCTCCAAATCTTTATTGTTTTTAAGGGTGGACTTAGTGATGGATACAAGACTCACATTGTGGAGAAGGAACTTCCAGATGAGACATACAATGAAGATAGTGTTGCATTATTCCGCATCCAGGGCCCTGGACCAGATAACATGCAAGCTATACAAGTTGAACCAGTTGCATCCTCCTTGAATTCCTCTTATTGTTACATACTTCATAATGGTCCAGCTGTCTTTACATGGTCTGGAAGCTCTACAACTGCTAATGACCAGGAACTTGTTGAGAGGATGCTGGATTTGATAAAGCCAAATTTACAATCCAAACCACAAAGGGAAGGTACAGAATCTGAACAATTTTGGGATTTGCTAGGAGGAAAATCAGAATATCCCAGCCAGAAGATCACTAGGGAGGCTGAAAGTGATCCTCATTTATTTTCTTGCTACTTCTCAAAAGGAAATTTAAAGGTCACAGAGGTATACAACTTTTCCCAGGATGATTTGATGACAGAAGACATTTTCATCTTGGATTGTCACTCTGAAATCTTTGTCTGGGTCGGCCAGCAGGTTGACCCCAAGAGTAGAATGCAGGCTCTTACAATTGGTGAGAAATTTCTAGACCATGATTTTCTTCTAGAAAAGTTATCTCATGCAGCTCCAGTATATGTTGTCAACGAAGGAAGTGAGCCACCTTTCTTCACTCGCTTCTTTAAATGGGATTCTGCAAAATCTGCAATACTGGGAAACTCATTTCAAAGGAAGCTTACAATCATGAAAAATGGGGGTGCTCCACTTTTGGATAAACCCAAAAGGAGAACACCTGCTTCTTATGGGGGAAGGTCTAGTAGTGTGCCAGATAAATCCCAGCGTTCCTCCCGCAGCATGTCTGTTAGTCCTGATCGTGTTCGTGTGAGGGGCAGGTCTCCAGCCTTTAATGCACTAGCAGCTAATTTCGAGAATCCTAATGCCAGGAATCTTTCCACTCCGCCTCCAGTAGTTAGAAAGCTGTATCCAAAATCTATGACACCAGATTCTGCAAAACTAGCGTCCAAATCTTCAGCGATAGCTGCACTTAGTTCTGGTTTTGAACAACCACCTTCGGCACGAGAAAGTTTGATACCTAGGTCAGTTAAAGTGAGTCCTGTTACCACCAAATCAAACCCGGAGACAAATGACAAAGAGAATTCTGTGAGCAGCAAAATGGAATCACTTACTATAAAAGAGGATGTTAAAGAGGAGGAAGTTGAAGACGAAGAAGGTCTTGTCATTTACCCATATGAACGCCTTAAAATAACATCTACAGATCCTGTAACAGACATTGATGTGACTAAACGAGAGACTTATCTATCATCAGCGGAATTCAAAGAGAAATTTGGGATGACAAAGGATGCTTTTTACAAGTTGCCCAAATGGAAACAGAACAAACTCAAAATGGCTGTTCAGTTATTCTAA 2889 0.4185 MAVSMRDLDPAFQGAGQKAGLEIWRIENFNPVPVPKSSYGKFFTGDSYVILKTTSSKSGALRHDIHYWLGKDTSQDEAGAAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGVASGFKHAEAEQHKIRLFVCRGKHVVHVKEVPFARSSLNHDDIFVLDTELKIFQFNGSNSSIQERAKALEVVQYIKDTYHEGKCEVAAIEDGKLMADPETGEFWGFFGGFAPLPRKTAGEDDKPADSHSPKLFSVEKGQAEPLEADSLKRELLDTNKCYILDCGLEVFVWMGRNTSLDERKSASGVADELVSGTDKLKPQIIRVIEGFETVMFKSKFNSWPQTTDVTVSEDGRGKVAALLKRQGVNVKGLLKADPVKEEPQPFIDCTGHLQVWRVNGQEKILLQASDQSKFYSGDCYIFQYTYPGEDKEDCLIGTWIGKNSVEEDRASANSLASKMVESMKFLASQARIYEGNEPIQFYSILQIFIVFKGGLSDGYKTHIVEKELPDETYNEDSVALFRIQGPGPDNMQAIQVEPVASSLNSSYCYILHNGPAVFTWSGSSTTANDQELVERMLDLIKPNLQSKPQREGTESEQFWDLLGGKSEYPSQKITREAESDPHLFSCYFSKGNLKVTEVYNFSQDDLMTEDIFILDCHSEIFVWVGQQVDPKSRMQALTIGEKFLDHDFLLEKLSHAAPVYVVNEGSEPPFFTRFFKWDSAKSAILGNSFQRKLTIMKNGGAPLLDKPKRRTPASYGGRSSSVPDKSQRSSRSMSVSPDRVRVRGRSPAFNALAANFENPNARNLSTPPPVVRKLYPKSMTPDSAKLASKSSAIAALSSGFEQPPSARESLIPRSVKVSPVTTKSNPETNDKENSVSSKMESLTIKEDVKEEEVEDEEGLVIYPYERLKITSTDPVTDIDVTKRETYLSSAEFKEKFGMTKDAFYKLPKWKQNKLKMAVQLF* 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1429 962 SUPERFAMILY Actin depolymerizing proteins 382 527 - -
Dod03g1429 962 MobiDBLite consensus disorder prediction 856 882 - -
Dod03g1429 962 SUPERFAMILY Actin depolymerizing proteins 511 615 - -
Dod03g1429 962 ProSiteProfiles Headpiece (HP) domain profile. 897 962 IPR003128 GO:0003779|GO:0007010
Dod03g1429 962 Gene3D Severin 613 732 IPR029006 -
Dod03g1429 962 Gene3D Severin 388 501 IPR029006 -
Dod03g1429 962 CDD gelsolin_S5_like 517 608 - -
Dod03g1429 962 PRINTS Gelsolin family signature 411 427 IPR007122 GO:0051015
Dod03g1429 962 PRINTS Gelsolin family signature 436 454 IPR007122 GO:0051015
Dod03g1429 962 PRINTS Gelsolin family signature 469 489 IPR007122 GO:0051015
Dod03g1429 962 PRINTS Gelsolin family signature 592 611 IPR007122 GO:0051015
Dod03g1429 962 PRINTS Gelsolin family signature 644 666 IPR007122 GO:0051015
Dod03g1429 962 PRINTS Gelsolin family signature 673 692 IPR007122 GO:0051015
Dod03g1429 962 PRINTS Gelsolin family signature 323 344 IPR007122 GO:0051015
Dod03g1429 962 PRINTS Gelsolin family signature 532 552 IPR007122 GO:0051015
Dod03g1429 962 PANTHER VILLIN 1 962 IPR007122 GO:0051015
Dod03g1429 962 Gene3D Severin 517 612 IPR029006 -
Dod03g1429 962 Gene3D Villin headpiece domain 900 962 IPR036886 GO:0003779|GO:0007010
Dod03g1429 962 PANTHER VILLIN-3-LIKE 1 962 - -
Dod03g1429 962 Gene3D Severin 133 246 IPR029006 -
Dod03g1429 962 SUPERFAMILY Actin depolymerizing proteins 595 717 - -
Dod03g1429 962 SUPERFAMILY VHP, Villin headpiece domain 888 962 IPR036886 GO:0003779|GO:0007010
Dod03g1429 962 MobiDBLite consensus disorder prediction 840 890 - -
Dod03g1429 962 Pfam Villin headpiece domain 927 962 IPR003128 GO:0003779|GO:0007010
Dod03g1429 962 CDD gelsolin_S2_like 140 223 - -
Dod03g1429 962 Gene3D Severin 7 132 IPR029006 -
Dod03g1429 962 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 256 427 IPR036180 -
Dod03g1429 962 Pfam Gelsolin repeat 150 216 IPR007123 -
Dod03g1429 962 Pfam Gelsolin repeat 269 337 IPR007123 -
Dod03g1429 962 Pfam Gelsolin repeat 637 712 IPR007123 -
Dod03g1429 962 Pfam Gelsolin repeat 28 111 IPR007123 -
Dod03g1429 962 Pfam Gelsolin repeat 410 479 IPR007123 -
Dod03g1429 962 CDD gelsolin_S3_like 254 343 - -
Dod03g1429 962 CDD gelsolin_S1_like 12 124 - -
Dod03g1429 962 SMART VHP_1 927 962 IPR003128 GO:0003779|GO:0007010
Dod03g1429 962 SUPERFAMILY Actin depolymerizing proteins 138 237 - -
Dod03g1429 962 SUPERFAMILY Actin depolymerizing proteins 9 147 - -
Dod03g1429 962 MobiDBLite consensus disorder prediction 755 777 - -
Dod03g1429 962 MobiDBLite consensus disorder prediction 741 784 - -
Dod03g1429 962 Gene3D Severin 247 356 IPR029006 -
Dod03g1429 962 SMART VILL_6 19 117 IPR007122 GO:0051015
Dod03g1429 962 SMART VILL_6 392 489 IPR007122 GO:0051015
Dod03g1429 962 SMART VILL_6 519 606 IPR007122 GO:0051015
Dod03g1429 962 SMART VILL_6 137 234 IPR007122 GO:0051015
Dod03g1429 962 SMART VILL_6 254 344 IPR007122 GO:0051015
Dod03g1429 962 SMART VILL_6 623 719 IPR007122 GO:0051015
Dod03g1429 962 MobiDBLite consensus disorder prediction 241 260 - -
Dod03g1429 962 CDD gelsolin_S4_like 386 489 - -
Dod03g1429 962 CDD gelsolin_S6_like 621 720 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1429 Dod-Chr3 18652885 18666896 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1429 - - adu:107483828 1766.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1429 03 18652885 18666896 Dod05g2271 05 48826520 48834812 PCT