Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2041 ATGGGTTCTCATCACATAAGGAGGCTTCTTCTGCGTCTGTGTTTATGGATGTACTTGGTGAGCTTCGTCACCTTCAATGTAGTGAATGCTGTGAATGAAAGTGGCTATGCAGCTGTGAAAGGGGTTGTTTTGATTCATGGGAAGTCTCATATTGGAAGGATTGATGATGATTTTGTGTGTGCAACTCTGGATTGGTGGCCTCCTCAGAAATGTGACTATGGTAGATGCAGCTGGGGGCATGCTTCTCTGCTCAACCTGGACCTCAAGAACAAAATTTTGTTAAATGCAATAAAAGCCTTTTCACCACTGAAAGTTAGATTAGGTGGAACTTTGCAAGATAAGGTCACATATGGGACCGAAGATAATCGGCAACCATGTACTCCATTTGTTAGGAACGCTTCTGACATGTTTGGTTTCACTGGAGGATGCTTACCGATGCATAGGTGGGATGAGCTAAACTTCTTTTTCAAACAAGCAGGGGCTAAGATTATCTTTGGATTGAATGCTCTTGCTGGAAGACATATACAAGCTGGTTCTGCAGTCGGACCTTGGAGCTACTCCAATGCTGAATCTTTAATACGTTACACTGTAGCAAAGCATTACACCATCCATGGTTGGGAACTTGGCAATGAATTGTGTGGAAATGGAATTGGAGCAAGTATTCCTGCAGATCAATATGCTTCTGATGTTGCTGCTTTGCGAAACATAATTCAAAATGTATATAGAGGGATTGAGCCTAAGCCACTACTCATTGCACCTGGGGGCTTCTTTGATGCAAATTGGTTCCAGGCATTTGTAAGAAAAGGGGGTAAATCAGTAGATGTGGTATCTCACCACATTTATAACCTTGGGGCAGGAGTTGATGAGCACCTAACTGAAAGAATTCTTGATCCTTCTTATCTTGATGGAGAGGCTAGCACATTCAGTAGCCTCAAAAATATACTGCAAACTTCAGCAACCTCAGCAAAAGCATGGGTTGGTGAGGCAGGAGGGGCTTACAATAGTGGCCATCATCTTGTGTCTGATGCATTTGTTTACAGCTTCTGGTATTTGGATCAGCTTGGCATGTCAGCTTCATATGGCACCAGAACATACTGCAGACAGAGTTTGATTGGAGGAAACTATGGTTTACTGAATACAGATACTTTCGTACCAAATCCAGACTATTATAGTGCTCTTCTTTGGCACCGACTTATGGGAGTGCGTGTCCTGGCAACTACCTTCTATGGGACAAAGAAGATAAGAGCCTATGCACACTGTGCAAAGCAATCCAAAGGAATCACAATACTATTACTCAACCTGGACAATAGCACCTCTGTACATGCTGAAGTGGCATCCAGATACTCTTAG 1350 0.4296 MGSHHIRRLLLRLCLWMYLVSFVTFNVVNAVNESGYAAVKGVVLIHGKSHIGRIDDDFVCATLDWWPPQKCDYGRCSWGHASLLNLDLKNKILLNAIKAFSPLKVRLGGTLQDKVTYGTEDNRQPCTPFVRNASDMFGFTGGCLPMHRWDELNFFFKQAGAKIIFGLNALAGRHIQAGSAVGPWSYSNAESLIRYTVAKHYTIHGWELGNELCGNGIGASIPADQYASDVAALRNIIQNVYRGIEPKPLLIAPGGFFDANWFQAFVRKGGKSVDVVSHHIYNLGAGVDEHLTERILDPSYLDGEASTFSSLKNILQTSATSAKAWVGEAGGAYNSGHHLVSDAFVYSFWYLDQLGMSASYGTRTYCRQSLIGGNYGLLNTDTFVPNPDYYSALLWHRLMGVRVLATTFYGTKKIRAYAHCAKQSKGITILLLNLDNSTSVHAEVASRYS* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2041 449 PANTHER HEPARANASE-LIKE PROTEIN 3 9 445 - -
Dod05g2041 449 PANTHER HEPARANASE-RELATED 9 445 - -
Dod05g2041 449 Pfam Glycosyl hydrolase family 79, N-terminal domain 41 355 IPR005199 GO:0016020|GO:0016798
Dod05g2041 449 SUPERFAMILY (Trans)glycosidases 54 399 IPR017853 -
Dod05g2041 449 Gene3D Glycosidases 76 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2041 Dod-Chr5 46387463 46391613 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2041 40 446 Glycoside Hydrolase AT5G61250 50.611 4.77e-156 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2041 K07964 - gmx:100778008 736.873
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2041 05 46387463 46391613 Dod05g2041 05 46387463 46391613 ECH
Dod05g2041 05 46387463 46391613 Dod03g1729 03 25204775 25209019 PCT