Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1729 ATGGGTTATAGGATTGTTCAGCTTCTTGGTCTGTGCATATGGATGTTGTTGTACTTTAGTTTGAGCTTAACTTTTGTGAGCACACAGAATGAGAGTGGAGATGCAGCTGTGAAAGGTACTGTCATCATTGATGGGAAATCAGTGATTGGTAACATTGATGATGATTTTGTCTGTGCAACTCTGGATTGGTGGCCTCCTGAGAAATGTGACTATGGGAGATGCAGTTGGGGCCTTGCATCTCTTCTCAATCTGGACCTCAACAACAAGCTTTTCTTAAATGCAGTGAAAGCCTTTTCACCGTTGAAACTTAGATTGGGTGGCAGTTTGCAAGACAAGGTCATATATGGGACTGAAGATTATGACAAACCATGTACTCCTTTTGTCAAAAATGAATCTGAAATGTTCGGTTTCACGCAAGGGTGCCTCCCATTGCATAGATGGGATGAACTTAACAAGTTTTTCGAGAAAGCAGGGGCTAAGATTGTCTTTGGATTAAACGCTCTTGCTGGGAAAACGATAAAATCCGGTTCGGCTGTTGGACCTTGGAACTGCACCAATGCTGAATCCTTTATTCGTTACACTGTTGGGAAGAAGTACACCATTGATGGATGGGAACTAGGCAATGAATTGAGTGGGACTGGAGTTGGAACAAGAATTGCTGCAGACCAATATGCTTCTGATTTAGCTGCTTTGCGAAACGTAGTTGACGATGCATATAGAGACATTGAGCCTAAGCCACTAGTGATTGCTCCTGGAGGTTTCTTTGATGTGAAGTGGTTCAAGGAGTTTATAAGCAAATCGGGTAAATCTTTGGATGTGATCACCCACCACATTTATAACCTTGGACCAGGAGTTGATGAGCACCTTGTGGAAAAAATTCTCAATCCTTCCTATCTTGATAGAGTGGCAAGCACATTCAGTGGCCTCCAAGATTTGATTGAAAGTTTAGGAACCTCAGCAACAGCATGGGTTGGTGAGTCAGGAGGGGCTTACAATAGTGGCCATCACCTTGTATCCGATGCATTCGTGTACAGTTTCTGGTACTTGGATCAGCTTGGCATGTCAGCTGCTTATGGCACTAAAACGTATTGCAGACAGAGTTTCATAGGAGGAAATTATGGTTTGCTCAATACTAGTACTTTCCAGCCCAATCCAGACTACTACAGTGCTCTTCTTTGGCACCGACTCATGGGAAGAAATGTACTGTCAACTACTTTCTCCGGGACAAAAAAGATAAGAGCTTATGCTCACTGTGCCAAGCAATCCCAAGGAATCACGGTACTATTGATCAACCTGGACAGCGAAACAGCAGTTGAAGCAGAAGTGACCTTGAAAAGCAAGACTAAGAGTTTGAGGCACAGAAAGATGTCTGATAATAAATCAAAACTTACGTTGCTACCTCCCCATGGTGCAAGTGAAAATGCAAGAGAAGAGTACCATCTAACTCCAGGGGATGGGAATATACATAGCCAAATCATGGTACTAAATGGGAGAACACTGAGTGTGAACTCAGACAATAATGAAATTCCTACTTTGGAGCCTCTATATGTAAACTCATCTGAGCCTATAAGGGTTGCCCCTTTATCCATTGTATTTGCCCATATACCAGATGCAGATGTTGCAGCTTGCAGCTAG 1635 0.4294 MGYRIVQLLGLCIWMLLYFSLSLTFVSTQNESGDAAVKGTVIIDGKSVIGNIDDDFVCATLDWWPPEKCDYGRCSWGLASLLNLDLNNKLFLNAVKAFSPLKLRLGGSLQDKVIYGTEDYDKPCTPFVKNESEMFGFTQGCLPLHRWDELNKFFEKAGAKIVFGLNALAGKTIKSGSAVGPWNCTNAESFIRYTVGKKYTIDGWELGNELSGTGVGTRIAADQYASDLAALRNVVDDAYRDIEPKPLVIAPGGFFDVKWFKEFISKSGKSLDVITHHIYNLGPGVDEHLVEKILNPSYLDRVASTFSGLQDLIESLGTSATAWVGESGGAYNSGHHLVSDAFVYSFWYLDQLGMSAAYGTKTYCRQSFIGGNYGLLNTSTFQPNPDYYSALLWHRLMGRNVLSTTFSGTKKIRAYAHCAKQSQGITVLLINLDSETAVEAEVTLKSKTKSLRHRKMSDNKSKLTLLPPHGASENAREEYHLTPGDGNIHSQIMVLNGRTLSVNSDNNEIPTLEPLYVNSSEPIRVAPLSIVFAHIPDADVAACS* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1729 544 PANTHER HEPARANASE-RELATED 6 543 - -
Dod03g1729 544 Gene3D Glycosidases 75 395 - -
Dod03g1729 544 PANTHER HEPARANASE-LIKE PROTEIN 3 6 543 - -
Dod03g1729 544 Pfam Glycosyl hydrolase family 79, N-terminal domain 39 353 IPR005199 GO:0016020|GO:0016798
Dod03g1729 544 SUPERFAMILY (Trans)glycosidases 52 397 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1729 Dod-Chr3 25204775 25209019 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1729 1 544 Glycoside Hydrolase AT5G61250 47.559 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1729 K07964 - gmx:100802477 850.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2041 05 46387463 46391613 Dod03g1729 03 25204775 25209019 PCT