Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1723 ATGTTGGCAGGTCCAACCTTTATTGTTTCAAGGGATGTTCCCAACTCTTGCGAGCAAGAGAACCAATGGTTTTACAATACTTTCTGCTTAGTGGAGTTCTCAAACAAGCGCCGGCTGGAGGTAGAAGGGAACCAAGCTGCGTCAGGAAAGTGTTGCAAACTTTCAGATGATCCTGAGGAGGAGGAAGAACAGATGAACATAATTTTTCTTTTCCCTTTGCATGACGACCAAATGAGTAAGCAAAATGATGCAGGTTTGCTGTCAGACACAAATGTGCTGATTAACCAACTCGGTCGGGACATGACAATCGATTGTATAGTACGATGCTCAAGGTCTGACTATGGCTCTATTGCCTCATTGAACAGAAGTTTTCGATCTCTCATTCGATCCGGAGAAATATATAAACTCAGGCGCCAATTGGGAATTGTAGAATACTGGGTTTACTTCTCTTGTACTCCCTATGAATGGGAGGCATTTGATCCAAACCGAGGTCGATGGATACACTTGCCTACAATGCCTTCTTATCAATTGTTTGTGTGTTCGGATAAGGAGTCATTGGGCGTTGGTACGGAACTGCTTGTTTTTGGAAGGGAAGTAATGACTCAAATCGTTTATAGATATAGCCTTCTAACTCACTCATGGACATATGGTGCTGAAATGAATACTCCCAGGTGCTTGTTTGGTTCTGCCAGCCTTGGAGAAATTGCCATATTGGCTGGTGGTGTTGATTCAGACGGCAAGATCTTGAGTGTGGCCGAGCTTTATAACTCGGACTCTGGAACATGGGAGACTCTTCCGAGCATGAACAAAGCGAGGAAGATGTGTTCCGGGGTATTTATGGATGGGAAATTTTATGTCATTGGCGGGGTTGGAACTGGAGAACCAAAGATGCTAACGTGCGGCGAGGAGTTTGATCTGAAGACAAGGAAATGGCGTGAGATACCCAACATGTTCCCACGAAATGAAGAAGCTGATGAGGAGAGTCAGAGGCAGGGTCCTGCTGAGGCACCTCCATTGGTTGCAGTTGTAAATAATGTATTGTATGCTGTAGATCATGCACAGTGGGAGGTAAAGAGATATGATAAAGACAGAAACTCATGGTTCAGCATTGGAAGACTTCCGGAGAAAGCAGACTCAGTGAATGGCTGGGGAATAGGCTTTCGAGCATGTGGAAATCGATTACTTGTTGTTGGTGGGCCGAAAGGTCCTGGCTCATCACGCTTGTTTGAGCTTAATTCTTGGATCCCAGATGGAGGTGCACCTAATTGGGACCTGCTTGCTATGAGTCAATCAGGGAGCTTTGTGTATAATTGTGCGGTGATGGGATGCTGA 1332 0.4527 MLAGPTFIVSRDVPNSCEQENQWFYNTFCLVEFSNKRRLEVEGNQAASGKCCKLSDDPEEEEEQMNIIFLFPLHDDQMSKQNDAGLLSDTNVLINQLGRDMTIDCIVRCSRSDYGSIASLNRSFRSLIRSGEIYKLRRQLGIVEYWVYFSCTPYEWEAFDPNRGRWIHLPTMPSYQLFVCSDKESLGVGTELLVFGREVMTQIVYRYSLLTHSWTYGAEMNTPRCLFGSASLGEIAILAGGVDSDGKILSVAELYNSDSGTWETLPSMNKARKMCSGVFMDGKFYVIGGVGTGEPKMLTCGEEFDLKTRKWREIPNMFPRNEEADEESQRQGPAEAPPLVAVVNNVLYAVDHAQWEVKRYDKDRNSWFSIGRLPEKADSVNGWGIGFRACGNRLLVVGGPKGPGSSRLFELNSWIPDGGAPNWDLLAMSQSGSFVYNCAVMGC* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1723 443 Pfam Kelch motif 223 269 IPR006652 GO:0005515
Dod05g1723 443 Pfam Kelch motif 271 317 IPR006652 GO:0005515
Dod05g1723 443 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP11 1 443 - -
Dod05g1723 443 Gene3D - 138 440 IPR015915 GO:0005515
Dod05g1723 443 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 1 443 - -
Dod05g1723 443 SMART kelc_smart 235 282 IPR006652 GO:0005515
Dod05g1723 443 SMART kelc_smart 191 234 IPR006652 GO:0005515
Dod05g1723 443 SUPERFAMILY Kelch motif 153 408 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1723 Dod-Chr5 42608866 42611606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1723 94 316 EF-hand Containing Proteins AT4G39560 26.786 3.72e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1723 - - gmx:100788507 598.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1610 02 20015603 20018810 Dod05g1723 05 42608866 42611606 PCT