Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1610 ATGTTGGAAGGTCGTTCCTGTCTGATTCGGAGGTTGTTTTGCAGCTCTTGCCAGGCAGACAACAACTGGTCTTACATGAAATACCTGCCTGAGTTCGACATCAAGAATGGCAAGCGCCCTATAGAAATCGATGCCGAGGAGGATGAACCTCATCCGAGGAAATGTACTAGGAGGTTGGATTCCTGCCACAGAGTTGAAGCAATGGATCAGGAGGAGGTTGAGGCTTTGAGTATTGGTGAAGATGTTGAAGAAGCTGAAGCTTGGACAGACCAGTCATTGGCTGAACAAGAACAGCATCGTGATGATGGTTCACTGGAATTCAGTGGCCATCTATCTGATAAACAGCAGCAGGGTCAGCCTGCGGATTCATTAGATGCCGGTGTTCAGCAATCTGATGAAGAACAGCTGCAGCAACTGCAGCATGCTATGAATTTGTTGAATTCTGGTGGCCAGCACTCTGATGAGGAGCAGCAGCAGCAGCAACAAGCTGGGGATTCATCGGATTCTGGTTCTCTTTTGCCGCGAATGAACCGAGACAGCTCAATCGCCTGCCTCAGTCGCTGTTCAAGGTCTGATTACGGCTCTCTGGCCTCGCTGAATAGGAGCTTCCGGAACATAATCCGAAGTGGCGAGCTCTATACATGGAGGAGACTAAATGGAATCATGGAACACTGGATTTATTTTTCCTGTACCCTCCTTGAATGGGAGGCCTATGATCCGAATCGCCAACGGTGGATGCATTTACCAAGGATGGCCTCTAATGAATGCTTCATGTGTTCAGATAAGGAATCTTTAGCTGTAGGTACTGAACTTCTTGTGTTTGGGAGGGAGCTGAGTTCCCTTGTCATTTACAGATACAGTCTTTTGACAAACTCATGGTCATCTGGAATGAGGATGAATGCTCCAAGATGCTTGTTCGGCTCTGCTAGCCTTGGAGAGATTGCGATTTTGGCCGGTGGGTGCGATTCAGAGGGACGTATCCTTGATTCTGCTGAACTATATAATTCCGAGAATCAAACATGGGAAACACTTCCAAACATGAAAAGGCCCAGGAAGATGTGTTCTGGGGTGTTTATGGATGGAAAGTTTTATGTTATTGGGGGAATTGGGGGAGGTGATTCCAATCCTCTTACCTGTGGCGAGGAGTACAATTTACAGACAAGAACATGGACAGAGATTCCTAACATGTCCCCTGGACGAAGTAGTAGGGGGTCCGAGATGCCTGCAACAACTGAGGCACCTCCTCTGGTTGCTGTTGTAAATGATGAATTGTATGCTGCTGATTACGCCGACATGGAGGTTAAAAAATACGATAAGGACAGAAGATTGTGGTTTACGGTTGGGAGACTGCCTGAGCAAGCAGTGTCGATGAATGGTTGGGGCCTTGCATTCAGGGCATGTGGAAATAGGCTTATTGTTATTTGTGGACCTAGAGCTCATGGTGAGGGTTTTATTGAACTCTATTCATGGGTGCCGGGCGAAGGACCTCCAGAGTGGCATCTGCTTGCCAGAAAACGGTCTGGCAATTTTGTTTATAATTGTGCTGTGATGGGATGCTGA 1560 0.4744 MLEGRSCLIRRLFCSSCQADNNWSYMKYLPEFDIKNGKRPIEIDAEEDEPHPRKCTRRLDSCHRVEAMDQEEVEALSIGEDVEEAEAWTDQSLAEQEQHRDDGSLEFSGHLSDKQQQGQPADSLDAGVQQSDEEQLQQLQHAMNLLNSGGQHSDEEQQQQQQAGDSSDSGSLLPRMNRDSSIACLSRCSRSDYGSLASLNRSFRNIIRSGELYTWRRLNGIMEHWIYFSCTLLEWEAYDPNRQRWMHLPRMASNECFMCSDKESLAVGTELLVFGRELSSLVIYRYSLLTNSWSSGMRMNAPRCLFGSASLGEIAILAGGCDSEGRILDSAELYNSENQTWETLPNMKRPRKMCSGVFMDGKFYVIGGIGGGDSNPLTCGEEYNLQTRTWTEIPNMSPGRSSRGSEMPATTEAPPLVAVVNDELYAADYADMEVKKYDKDRRLWFTVGRLPEQAVSMNGWGLAFRACGNRLIVICGPRAHGEGFIELYSWVPGEGPPEWHLLARKRSGNFVYNCAVMGC* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1610 519 MobiDBLite consensus disorder prediction 86 133 - -
Dod02g1610 519 SUPERFAMILY Kelch motif 232 515 IPR015915 GO:0005515
Dod02g1610 519 Gene3D - 218 514 IPR015915 GO:0005515
Dod02g1610 519 MobiDBLite consensus disorder prediction 109 133 - -
Dod02g1610 519 Pfam Kelch motif 302 347 IPR006652 GO:0005515
Dod02g1610 519 Pfam Kelch motif 350 397 IPR006652 GO:0005515
Dod02g1610 519 MobiDBLite consensus disorder prediction 93 108 - -
Dod02g1610 519 SMART kelc_smart 270 313 IPR006652 GO:0005515
Dod02g1610 519 SMART kelc_smart 362 410 IPR006652 GO:0005515
Dod02g1610 519 SMART kelc_smart 314 361 IPR006652 GO:0005515
Dod02g1610 519 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 1 519 - -
Dod02g1610 519 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP11 1 519 - -
Dod02g1610 519 MobiDBLite consensus disorder prediction 147 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1610 Dod-Chr2 20015603 20018810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1610 179 395 EF-hand Containing Proteins AT4G39560 27.064 5.58e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1610 - - gmx:100818865 806.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1610 02 20015603 20018810 Dod02g1610 02 20015603 20018810 ECH
Dod02g1610 02 20015603 20018810 Dod05g1723 05 42608866 42611606 PCT