Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1659 ATGCCACGCCGTGTGATGAATAATAATCAGAAATCATGGATCATCAGTTCCACAGGCTCAACGGCACCGGCTCCTTATCCGACTCCTCCAACCACCACCAAACACATCCAACCTCTCTCGCCTCACAACGCAGCCTCGCTTCAGTGCTTTCCCTCAACTCACACAACAGCATCAACAACCCTTATTCCACCGCCTCTCACACCTGCCTCACAACTCTCATCAAACCCCACAACAACACATCCTCCTCCTACACATCCTCCCTTACCCTCTCAGGCAAATTCCTCTACACAGGGCTCTTCCGACAGAGAAATCAGGTCCTGGAACCGCACCGAACTACTCAATAATCCCCAGCAACAATCAATAACCACCAACTCTACATTTGTTGCTGCTGGAAAGGGTGCTGTGAAGTCCCTAGTAGTTCATTCCGACAAGCTTTTCACTGCCCACCAAGACCACAAAATCCGGGTCTGGAAGACCATCACCACCAATAATCAAGAACGAGACCAACAACAACAACAACACAAGTACACGCGTTTAGCGACACTCCCAACGCTTTGCGACCGCGTCACGAAGCTCTTGGTGCCCAAGAACCACGTCCAAATCCGAAGGCACAAGAAGTGCACTTGGGTTCATCACGTGGACACCGTTTCCTCCCTTGCCTTGTCCAAAGACGGGACCTTGTTGTACTCGGTTTCATGGGACAGGACAATCAAGGTTTGGCGTACCAAAGGCTTCGCGTGTTTGGAATCGGTAACCAACGCTCACGATGACGCCTATAAACGCGGTCGCAGTTTGCGACGATGGGCGCAGAAACACAATTCTGGGATCAATGCTTTGGCTCTTAGTAGTGATGGGTCTTTGCTATATTCCGGTGCATGTGATAGATCGATATTGGTTTGGGAGAAGGAAGAGGAAGGAGAAGGTAAAATGGTGGTGGTGGGTGCGATTAGGGGGCACACAAGGTCTATATTATGTTTGGTTGTGATGTTGGATTTGGTGTGCAGTGGTTCTGAGGACAAGACTATTCGGGTTTGGAGAGGTGTTTGCAGAGAGTATTATTGTGTGGCTGTTTTGGAAGGGCATAGAGGACCGATTAAGAGCTTAACTGCGGAGGTTGATCATTGCGACGACCCTTCGGAAGCATCGTTCCTTGTCTATAGTGGCAGTTTGGACTGCGACGTCAAGGTTTGGCAGGTTTTTGTTCCTCTTCTCTAA 1215 0.4963 MPRRVMNNNQKSWIISSTGSTAPAPYPTPPTTTKHIQPLSPHNAASLQCFPSTHTTASTTLIPPPLTPASQLSSNPTTTHPPPTHPPLPSQANSSTQGSSDREIRSWNRTELLNNPQQQSITTNSTFVAAGKGAVKSLVVHSDKLFTAHQDHKIRVWKTITTNNQERDQQQQQHKYTRLATLPTLCDRVTKLLVPKNHVQIRRHKKCTWVHHVDTVSSLALSKDGTLLYSVSWDRTIKVWRTKGFACLESVTNAHDDAYKRGRSLRRWAQKHNSGINALALSSDGSLLYSGACDRSILVWEKEEEGEGKMVVVGAIRGHTRSILCLVVMLDLVCSGSEDKTIRVWRGVCREYYCVAVLEGHRGPIKSLTAEVDHCDDPSEASFLVYSGSLDCDVKVWQVFVPLL* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1659 404 PANTHER F-BOX AND WD40 DOMAIN PROTEIN 268 404 IPR045182 -
Dod05g1659 404 PANTHER F-BOX AND WD40 DOMAIN PROTEIN 97 259 IPR045182 -
Dod05g1659 404 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 209 240 - -
Dod05g1659 404 ProSiteProfiles Trp-Asp (WD) repeats profile. 269 301 IPR001680 GO:0005515
Dod05g1659 404 SUPERFAMILY WD40 repeat-like 98 399 IPR036322 GO:0005515
Dod05g1659 404 Pfam WD domain, G-beta repeat 354 397 IPR001680 GO:0005515
Dod05g1659 404 Pfam WD domain, G-beta repeat 210 240 IPR001680 GO:0005515
Dod05g1659 404 Pfam WD domain, G-beta repeat 315 345 IPR001680 GO:0005515
Dod05g1659 404 Pfam WD domain, G-beta repeat 272 300 IPR001680 GO:0005515
Dod05g1659 404 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 269 301 - -
Dod05g1659 404 MobiDBLite consensus disorder prediction 35 78 - -
Dod05g1659 404 Gene3D - 89 197 IPR015943 GO:0005515
Dod05g1659 404 ProSiteProfiles Trp-Asp (WD) repeats profile. 316 345 IPR001680 GO:0005515
Dod05g1659 404 MobiDBLite consensus disorder prediction 15 103 - -
Dod05g1659 404 PANTHER MYOSIN HEAVY CHAIN KINASE B-LIKE PROTEIN 268 404 - -
Dod05g1659 404 PANTHER MYOSIN HEAVY CHAIN KINASE B-LIKE PROTEIN 97 259 - -
Dod05g1659 404 ProSiteProfiles Trp-Asp (WD) repeats profile. 209 250 IPR001680 GO:0005515
Dod05g1659 404 Gene3D - 198 260 IPR015943 GO:0005515
Dod05g1659 404 SMART WD40_4 202 241 IPR001680 GO:0005515
Dod05g1659 404 SMART WD40_4 120 158 IPR001680 GO:0005515
Dod05g1659 404 SMART WD40_4 309 346 IPR001680 GO:0005515
Dod05g1659 404 SMART WD40_4 351 398 IPR001680 GO:0005515
Dod05g1659 404 SMART WD40_4 261 301 IPR001680 GO:0005515
Dod05g1659 404 Gene3D - 261 400 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1659 Dod-Chr5 41855071 41856388 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1659 - - cit:102616409 323.553
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1659 05 41855071 41856388 Dod05g1659 05 41855071 41856388 ECH
Dod05g1659 05 41855071 41856388 Dod09g0317 09 4861854 4863355 PCT