Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1468 ATGGCAAAGAATGTGGGGATCCTCGCCGTTGACATCTACTTCCCTCCCACCTGTGTTCAGCAGGAAGCACTGGAGGCTCATGATGGTGCCAGTAAAGGGAAATATACTATTGGACTTGGACAAGATTGCATGGCGTTTTGTACAGAGTTAGAAGATGTCATCTCAATGAGCTTGACAGTAGTTAGTTCCCTTCTTGAGAAGTATGAGATTGATCCCAAACAAATTGGTCGCCTGGAAGTAGGCAGTGAGACTGTGATAGACAAAAGCAAATCCATCAAGACATTCATCATGCAGATCTTTGAGAAATATGGAAATACTGATATCGAGGGTGTTGATTCAACTAATGCATGCTATGGAGGAACTGCTGCTTTGTTCAATTGTGTCAATTGGGTGGAGAGCAGTTCATGTGATGGACGTTATGGACTTGTTGTCTGCACTGACAGTGCTGTATATGCTGAAGGACCTGCTCGGCCTACTGGTGGTGCTGCTGCTATTGCTATGCTAATTGGTCCTGATGCACCCATTGCTTTTGAAAGCAAATTGAGGGCAAGTCATATGTCTCATGCCTATGATTTTTACAAGCCTAATCTTGCCAGTGAATATCCGGTTGTTGATGGGAAGCTTTCTCAGACTTGTTACCTTATGGCTCTTGATTCTTGCTATAAACAGCTCAGTCACAAATATGAGAAGCTCCATGGAAAACCATTTTCTCTTTCTGATGCTGAATACTTTGTATTTCACTCTCCTTATAACAAGCTTGTACAGAAAAGTTTTGCTCGGTTGGTGTTCAACAATTTCTTGAAGAATCCCAGCTTGGTGGATAAGGCTGCTAAAGAAAAGCTGGAACCTTTTGCAACATTATCTGGTGATGAGAGCTATCAAAGTCGGGATCTAGAAAAGGTATCCCAGCAAGTTGCGAAGCCTCTATATGATGAAAAGGTGCTACCAGGCACTTTGTTACCAAAACAAGTTGGTAACATGTACACTGCATCTCTCTATGCAGCGTTTATTTCGCTTCTTCACAGCAAACATAGCACATTGGCAGGTAAGAGGGTGATACTATTCTCGTATGGAAGTGGCTTAACTGCCACACTGTTTTCCTTGCAATTACATGAAGGTCAACATCCATTTAGCCTGTCAAACATTGCTAGAGTGGTGGGTGTTGCTGGAAAACTGAAGTCAAGGCATGAGTTTCCTCCGGAGAAGTTCGTTGAAACCCTGCAGCTAATGGAACACAGGTATGGTGCCAAGGAGTTTGTAACAAGCAAGGACACTAGCCTTTTAGCTCCAGGCACATTCTATCTCACTGAAGTAGACTCCCTGTATCGTAGATTCTATGAAAAGAAACCTAGTAAAAACGATTCGACCACCGCCACCACCACAGAAAACGGTTTGGTTGCCAATGGTCACTGA 1413 0.4331 MAKNVGILAVDIYFPPTCVQQEALEAHDGASKGKYTIGLGQDCMAFCTELEDVISMSLTVVSSLLEKYEIDPKQIGRLEVGSETVIDKSKSIKTFIMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESSSCDGRYGLVVCTDSAVYAEGPARPTGGAAAIAMLIGPDAPIAFESKLRASHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKQLSHKYEKLHGKPFSLSDAEYFVFHSPYNKLVQKSFARLVFNNFLKNPSLVDKAAKEKLEPFATLSGDESYQSRDLEKVSQQVAKPLYDEKVLPGTLLPKQVGNMYTASLYAAFISLLHSKHSTLAGKRVILFSYGSGLTATLFSLQLHEGQHPFSLSNIARVVGVAGKLKSRHEFPPEKFVETLQLMEHRYGAKEFVTSKDTSLLAPGTFYLTEVDSLYRRFYEKKPSKNDSTTATTTENGLVANGH* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1468 470 SUPERFAMILY Thiolase-like 175 447 IPR016039 GO:0016746
Dod05g1468 470 ProSitePatterns Hydroxymethylglutaryl-coenzyme A synthase active site. 105 120 IPR000590 GO:0004421|GO:0008299
Dod05g1468 470 SUPERFAMILY Thiolase-like 4 172 IPR016039 GO:0016746
Dod05g1468 470 MobiDBLite consensus disorder prediction 451 470 - -
Dod05g1468 470 CDD init_cond_enzymes 4 368 - -
Dod05g1468 470 MobiDBLite consensus disorder prediction 452 470 - -
Dod05g1468 470 Gene3D - 1 451 IPR016039 GO:0016746
Dod05g1468 470 Pfam Hydroxymethylglutaryl-coenzyme A synthase C terminal 175 449 IPR013746 GO:0004421|GO:0006084|GO:0010142
Dod05g1468 470 Pfam Hydroxymethylglutaryl-coenzyme A synthase N terminal 2 174 IPR013528 -
Dod05g1468 470 PANTHER 3-HYDROXY-3-METHYLGLUTARYL COENZYME A SYNTHASE 1 457 - -
Dod05g1468 470 TIGRFAM HMG-CoA-S_euk: hydroxymethylglutaryl-CoA synthase 2 449 IPR010122 GO:0004421|GO:0008299
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1468 Dod-Chr5 39383352 39388926 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1468 K01641 - gmx:100780554 834.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1468 05 39383352 39388926 Dod02g1051 02 13134167 13139448 PCT