Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1462 ATGGACAATCATTCACAATCTTCGACGAAACTCAACCTCCCTCAGACTCCAACAATGTCTCATCTTCAACCTCCTCCTTTTTCTTCTTCTCTGTCCTTCGACTCCCGCCACGTGGACAGAATGATCAACTCCTCTCACCGCAGCTCTCCTTCTAGAACCATCTACTCCGACAGGTTCATTCCCAGCAGATCTGCCTCCAAATTTGCCCTCTTCGACATTGCCTCTCCGGCGCCGTCGGCTGCCGCGGCGTCTCCGGCGACGGAGGGACGGGAGGACAGTTCTAGTGCCTATACGACACTGCTGAGGACCGCGTTGTTCGGACCAGACGCCGCCGGCGTGGCGGTGCCGGTGACGCCGGAGAAGAGGAGCTCGCCGGCGATGATGCTCCCCAGCCGGAACATCTTTCGGTACAAGACGGAGACTCGGCAGTCGTTTCACTCGCTCTCGCCGTTCATGTCCGACGATGTGGTCCCCGGCGGCGTGAATCATAGCCCCGTCAAGGCTCCGAGGAAGGTTCCTCGATCGCCTTATAAGGTTCTGGATGCACCTGCGCTGCAAGACGATTTTTATCTGAATCTCGTAGATTGGTCTTCGCACAACGTGTTGGCTGTTGGTCTCGGAAACTGTGTTTATCTGTGGAATGCTTGTAGCAGCAAGGTAACTAAATTATGTGATTTGGGGATTGGCGACTGCGTTTGTTCAGTTGGCTGGGCTCAACGGGGTACCCACCTTGCTGTTGGAACTAGCAATGGTAAAGTTCAGATTTGGGATGCATCACGATGCAAGAAGATAAGATTGATGGAGGGTCATCGTTTACGTGTTGGAGCCTTGGCCTGGAGTTCTTCTCTTTTGTCTTCGGGCGGCCGGGATAAGAATATATATCAACGAGATATACGAGCACAGGAAGATTTTGTCAGTAAACTTTCAGGGCACAAATCAGAGGTTTGTGGGCTGAAGTGGTCATATGATAACCGTGAGTTAGCATCCGGAGGAAATGACAACAGATTGTTTGTTTGGAATCAACACTCAACCCAGCCTGTCCTAAAGTACTGTGAGCATACAGCAGCTGTTAAAGCTATTGCATGGTCTCCTCATCTTCATGGACTTCTTGCATCTGGGGGAGGAACTGCAGACCGGTGTATTCGTTTCTGGAATACAACCACAAACTCACACTTAAGCTGTATGGACACTGGAAGCCAGGTTTGCAATCTTGTTTGGTCTAAAAATGTTAATGAATTGGTAAGCACACATGGCTACTCCCAGAACCAGATAATAGTTTGGAGATACCCCACCATGTCAAAGTTGGCCACTCTTACAGGCCATACTTATAGAGTTCTTTATCTTGCCATCTCTCCAGATGGACAGACTATTGTAACTGGAGCAGGAGATGAAACACTTAGATTTTGGAATGTATTCCCTTCCCCTAAATCGCAGAATACTGACAGTGAAATTGGAGCATCATCTCTTGGAAGAACAATTATTAGGTGA 1488 0.4933 MDNHSQSSTKLNLPQTPTMSHLQPPPFSSSLSFDSRHVDRMINSSHRSSPSRTIYSDRFIPSRSASKFALFDIASPAPSAAAASPATEGREDSSSAYTTLLRTALFGPDAAGVAVPVTPEKRSSPAMMLPSRNIFRYKTETRQSFHSLSPFMSDDVVPGGVNHSPVKAPRKVPRSPYKVLDAPALQDDFYLNLVDWSSHNVLAVGLGNCVYLWNACSSKVTKLCDLGIGDCVCSVGWAQRGTHLAVGTSNGKVQIWDASRCKKIRLMEGHRLRVGALAWSSSLLSSGGRDKNIYQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNSHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSKLATLTGHTYRVLYLAISPDGQTIVTGAGDETLRFWNVFPSPKSQNTDSEIGASSLGRTIIR* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1462 495 SUPERFAMILY WD40 repeat-like 177 477 IPR036322 GO:0005515
Dod05g1462 495 PANTHER CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATED 20 495 IPR033010 GO:0010997|GO:0097027|GO:1904668
Dod05g1462 495 ProSitePatterns Trp-Asp (WD) repeats signature. 457 471 IPR019775 -
Dod05g1462 495 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 308 340 - -
Dod05g1462 495 SMART WD40_4 431 470 IPR001680 GO:0005515
Dod05g1462 495 SMART WD40_4 217 257 IPR001680 GO:0005515
Dod05g1462 495 SMART WD40_4 260 297 IPR001680 GO:0005515
Dod05g1462 495 SMART WD40_4 301 340 IPR001680 GO:0005515
Dod05g1462 495 SMART WD40_4 343 385 IPR001680 GO:0005515
Dod05g1462 495 SMART WD40_4 173 214 IPR001680 GO:0005515
Dod05g1462 495 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 438 471 - -
Dod05g1462 495 MobiDBLite consensus disorder prediction 1 33 - -
Dod05g1462 495 Pfam WD domain, G-beta repeat 305 340 IPR001680 GO:0005515
Dod05g1462 495 Pfam WD domain, G-beta repeat 345 385 IPR001680 GO:0005515
Dod05g1462 495 Pfam WD domain, G-beta repeat 434 470 IPR001680 GO:0005515
Dod05g1462 495 ProSiteProfiles Trp-Asp (WD) repeats profile. 232 266 IPR001680 GO:0005515
Dod05g1462 495 Gene3D - 166 475 IPR015943 GO:0005515
Dod05g1462 495 ProSiteProfiles Trp-Asp (WD) repeats profile. 438 471 IPR001680 GO:0005515
Dod05g1462 495 Pfam Anaphase-promoting complex subunit 4 WD40 domain 229 281 IPR024977 -
Dod05g1462 495 ProSiteProfiles Trp-Asp (WD) repeats profile. 308 349 IPR001680 GO:0005515
Dod05g1462 495 PANTHER PROTEIN FIZZY-RELATED 1 20 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1462 Dod-Chr5 39232162 39240113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1462 244 473 Miscellaneous Gene Families AT5G08390 21.030 1.64e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1462 K03364 - gmx:100780928 844.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1462 05 39232162 39240113 Dod02g1045 02 13072523 13079395 PCT